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Limk2 Gene Detail
Summary
  • Symbol
    Limk2
  • Name
    LIM motif-containing protein kinase 2
  • Synonyms
    A930024P04Rik, Limk2a, Limk2b, LIM kinase 2, whe
  • Feature Type
    protein coding gene
  • IDs
    MGI:1197517
    NCBI Gene: 16886
  • Gene Overview
    MyGene.info: LIMK2
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:3344256-3409189 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 2.34 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    209 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1197517
protein coding gene Chr11:3343297-3409238 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017956
protein coding gene Chr11:196607-265571 (-)
A/J MGP_AJ_G0017929
protein coding gene Chr11:257902-323229 (-)
AKR/J MGP_AKRJ_G0017893
protein coding gene Chr11:266492-335988 (-)
BALB/cJ MGP_BALBcJ_G0017897
protein coding gene Chr11:229925-294687 (-)
C3H/HeJ MGP_C3HHeJ_G0017710
protein coding gene Chr11:207706-275325 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018350
protein coding gene Chr11:265631-331595 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016009
protein coding gene Chr11:174819-240771 (-)
CAST/EiJ MGP_CASTEiJ_G0017272
protein coding gene Chr11:156337-225136 (-)
CBA/J MGP_CBAJ_G0017685
protein coding gene Chr11:430236-501628 (-)
DBA/2J MGP_DBA2J_G0017796
protein coding gene Chr11:179296-244049 (-)
FVB/NJ MGP_FVBNJ_G0017787
protein coding gene Chr11:206001-271085 (-)
LP/J MGP_LPJ_G0017866
protein coding gene Chr11:302680-371970 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017813
protein coding gene Chr11:186064-256926 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018389
protein coding gene Chr11:271679-341699 (-)
PWK/PhJ MGP_PWKPhJ_G0017052
protein coding gene Chr11:154574-221279 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016848
protein coding gene Chr11:233033-302083 (-)
WSB/EiJ MGP_WSBEiJ_G0017326
protein coding gene Chr11:151539-220136 (-)



Homology
more
  • Human Ortholog
    LIMK2, LIM domain kinase 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LIMK2, LIM domain kinase 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 3985
    neXtProt AC: NX_P53671
    UniProt: P53671

  • Chr Location
    22q12.2; chr22:31212264-31280080 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    28 phenotypes from 4 alleles in 4 genetic backgrounds
    2 images
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Male homozygotes for targeted null mutations exhibit small testes but are fertile. Mutant kidneys have fewer glomeruli and dilated renal tubules, but function normally. Mice homozygous for a gene trap allele or spontaneous mutation have open eyelids at birth, corneal abnormalities and inflammation.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
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    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020451 Ensembl Gene Model | MGI Sequence Detail 64934 C57BL/6J ±  kb
    transcript ENSMUST00000101638 Ensembl | MGI Sequence Detail 3514 Not Applicable  
    polypeptide ENSMUSP00000099162 Ensembl | MGI Sequence Detail 638 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 35
      Genomic 7
      cDNA 24
      Primer pair 3
      Other 1

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:2144678, MGI:2443338, MGI:3612834
    References
    more
    • Summaries
      All 60
      Developmental Gene Expression 14
      Gene Ontology 8
      Phenotypes 17
    • Earliest
      J:44929 Koshimizu U, et al., cDNA cloning, genomic organization, and chromosomal localization of the mouse LIM motif-containing kinase gene, Limk2. Biochem Biophys Res Commun. 1997 Dec 18;241(2):243-50
    • Latest
      J:236656 Liu A, et al., Neuroligin 1 regulates spines and synaptic plasticity via LIMK1/cofilin-mediated actin reorganization. J Cell Biol. 2016 Feb 15;212(4):449-63

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory