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Kcns1 Gene Detail
Summary
  • Symbol
    Kcns1
  • Name
    K+ voltage-gated channel, subfamily S, 1
  • Synonyms
    Kv9.1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1197019
    NCBI Gene: 16538
  • Gene Overview
    MyGene.info: KCNS1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:164163619-164171113 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 84.60 cM, cytoband H3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1197019
protein coding gene Chr2:164163619-164171113 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026837
protein coding gene Chr2:169555561-169563047 (-)
A/J MGP_AJ_G0026803
protein coding gene Chr2:162687610-162695101 (-)
AKR/J MGP_AKRJ_G0026774
protein coding gene Chr2:167510466-167517957 (-)
BALB/cJ MGP_BALBcJ_G0026812
protein coding gene Chr2:163030281-163037772 (-)
C3H/HeJ MGP_C3HHeJ_G0026554
protein coding gene Chr2:167864576-167872068 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027260
protein coding gene Chr2:174489986-174497480 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024630
protein coding gene Chr2:155999146-156006688 (-)
CAST/EiJ MGP_CASTEiJ_G0026015
protein coding gene Chr2:168287304-168294826 (-)
CBA/J MGP_CBAJ_G0026531
protein coding gene Chr2:180775765-180783256 (-)
DBA/2J MGP_DBA2J_G0026669
protein coding gene Chr2:161857384-161864874 (-)
FVB/NJ MGP_FVBNJ_G0026635
protein coding gene Chr2:160235578-160243077 (-)
LP/J MGP_LPJ_G0026772
protein coding gene Chr2:169656521-169664007 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026657
protein coding gene Chr2:184438927-184446432 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027316
protein coding gene Chr2:167410811-167418303 (-)
PWK/PhJ MGP_PWKPhJ_G0025749
protein coding gene Chr2:161435875-161443382 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025552
protein coding gene Chr2:166285837-166292513 (-)
WSB/EiJ MGP_WSBEiJ_G0026085
protein coding gene Chr2:168276162-168283652 (-)



Homology
more
  • Human Ortholog
    KCNS1, potassium voltage-gated channel modifier subfamily S member 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    KCNS1, potassium voltage-gated channel modifier subfamily S member 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    Kv9.1
  • Links
    NCBI Gene ID: 3787
    neXtProt AC: NX_Q96KK3
    UniProt: Q96KK3

  • Chr Location
    20q13.12; chr20:45091214-45101112 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 16538 NCBI Gene Model | MGI Sequence Detail 7495 C57BL/6J ±  kb
transcript NM_008435 RefSeq | MGI Sequence Detail 2727 C57BL/6  
polypeptide O35173 UniProt | EBI | MGI Sequence Detail 497 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 10
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 1
  • Earliest
    J:43210 Salinas M, et al., New modulatory alpha subunits for mammalian Shab K+ channels. J Biol Chem. 1997 Sep 26;272(39):24371-9
  • Latest
    J:232973 Hirst CS, et al., Ion channel expression in the developing enteric nervous system. PLoS One. 2015;10(3):e0123436

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory