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Ccdc97 Gene Detail
Summary
  • Symbol
    Ccdc97
  • Name
    coiled-coil domain containing 97
  • Synonyms
    1200014H14Rik, 2810446P04Rik, D7Ertd462e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196455
    NCBI Gene: 52132
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:25711112-25719035 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 13.99 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196455
protein coding gene Chr7:25711106-25719088 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031877
protein coding gene Chr7:24218913-24226899 (-)
A/J MGP_AJ_G0031856
protein coding gene Chr7:23586245-23594227 (-)
AKR/J MGP_AKRJ_G0031785
protein coding gene Chr7:24192634-24200616 (-)
BALB/cJ MGP_BALBcJ_G0031861
protein coding gene Chr7:23825991-23833973 (-)
C3H/HeJ MGP_C3HHeJ_G0031582
protein coding gene Chr7:24602250-24610232 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032325
protein coding gene Chr7:25035398-25043380 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029380
protein coding gene Chr7:24926108-24934251 (-)
CAST/EiJ MGP_CASTEiJ_G0030922
protein coding gene Chr7:18016424-18024413 (-)
CBA/J MGP_CBAJ_G0031547
protein coding gene Chr7:25918739-25926721 (-)
DBA/2J MGP_DBA2J_G0031701
protein coding gene Chr7:23480262-23488244 (-)
FVB/NJ MGP_FVBNJ_G0031654
protein coding gene Chr7:23511622-23519604 (-)
LP/J MGP_LPJ_G0031780
protein coding gene Chr7:24496517-24504503 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031691
protein coding gene Chr7:25644020-25651997 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032357
protein coding gene Chr7:23830418-23838400 (-)
PWK/PhJ MGP_PWKPhJ_G0030646
protein coding gene Chr7:18432341-18440376 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030476
protein coding gene Chr7:15160355-15168316 (-)
WSB/EiJ MGP_WSBEiJ_G0031025
protein coding gene Chr7:24056440-24064414 (-)



Homology
more
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 90324
    neXtProt AC: NX_Q96F63
    UniProt: Q96F63

  • Chr Location
    19q13.2; chr19:41309855-41324883 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52132 NCBI Gene Model | MGI Sequence Detail 7924 C57BL/6J ±  kb
transcript NM_001368383 RefSeq | MGI Sequence Detail 3254 C57BL/6  
polypeptide Q9DBT3 UniProt | EBI | MGI Sequence Detail 340 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 69
    cDNA 68
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1920021, MGI:1921378, MGI:2141840
References
more
  • Summaries
    All 30
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory