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Ccdc97 Gene Detail
Summary
  • Symbol
    Ccdc97
  • Name
    coiled-coil domain containing 97
  • Synonyms
    1200014H14Rik, 2810446P04Rik, D7Ertd462e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196455
    NCBI Gene: 52132
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:25711106-25719088 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 13.99 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196455
protein coding gene Chr7:25711106-25719819 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031877
protein coding gene Chr7:24218913-24226899 (-)
A/J MGP_AJ_G0031856
protein coding gene Chr7:23586245-23594227 (-)
AKR/J MGP_AKRJ_G0031785
protein coding gene Chr7:24192634-24200616 (-)
BALB/cJ MGP_BALBcJ_G0031861
protein coding gene Chr7:23825991-23833973 (-)
C3H/HeJ MGP_C3HHeJ_G0031582
protein coding gene Chr7:24602250-24610232 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032325
protein coding gene Chr7:25035398-25043380 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029380
protein coding gene Chr7:24926108-24934251 (-)
CAST/EiJ MGP_CASTEiJ_G0030922
protein coding gene Chr7:18016424-18024413 (-)
CBA/J MGP_CBAJ_G0031547
protein coding gene Chr7:25918739-25926721 (-)
DBA/2J MGP_DBA2J_G0031701
protein coding gene Chr7:23480262-23488244 (-)
FVB/NJ MGP_FVBNJ_G0031654
protein coding gene Chr7:23511622-23519604 (-)
LP/J MGP_LPJ_G0031780
protein coding gene Chr7:24496517-24504503 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031691
protein coding gene Chr7:25644020-25651997 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032357
protein coding gene Chr7:23830418-23838400 (-)
PWK/PhJ MGP_PWKPhJ_G0030646
protein coding gene Chr7:18432341-18440376 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030476
protein coding gene Chr7:15160355-15168316 (-)
WSB/EiJ MGP_WSBEiJ_G0031025
protein coding gene Chr7:24056440-24064414 (-)



Homology
more
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 90324
    neXtProt AC: NX_Q96F63
    UniProt: Q96F63

  • Chr Location
    19q13.2; chr19:41309855-41324883 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000002608 Ensembl Gene Model | MGI Sequence Detail 7983 C57BL/6J ±  kb
transcript ENSMUST00000002683 Ensembl | MGI Sequence Detail 3032 Not Applicable  
polypeptide ENSMUSP00000002683 Ensembl | MGI Sequence Detail 340 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 69
    cDNA 68
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1920021, MGI:1921378, MGI:2141840
References
more
  • Summaries
    All 30
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory