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Carhsp1 Gene Detail
Summary
  • Symbol
    Carhsp1
  • Name
    calcium regulated heat stable protein 1
  • Synonyms
    1200011K09Rik, D16Ertd465e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196368
    NCBI Gene: 52502
  • Gene Overview
    MyGene.info: CARHSP1
Location & Maps
more
  • Sequence Map
    Chr16:8658587-8672153 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      13567 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 4.26 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CARHSP1, calcium regulated heat stable protein 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CARHSP1, calcium regulated heat stable protein 1
    Orthology source: HomoloGene
  • Synonyms
    CRHSP24, CRHSP-24, CSDC1
  • Links
    NCBI Gene ID: 23589
    neXtProt AC: NX_Q9Y2V2

  • Chr Location
    16p13.2; chr16:8852942-8869012 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    41
  • Gene trapped
    41
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000008393 Ensembl Gene Model | MGI Sequence Detail 13567 C57BL/6J ±  kb
transcript ENSMUST00000008537 Ensembl | MGI Sequence Detail 2849 Not Applicable  
polypeptide ENSMUSP00000008537 Ensembl | MGI Sequence Detail 148 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    67 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000005042 calcium-regulated heat stable protein 1
  • InterPro Domains
    IPR019844 Cold-shock conserved site
    IPR011129 Cold shock protein
    IPR002059 Cold-shock protein, DNA-binding
    IPR012340 Nucleic acid-binding, OB-fold
Molecular
Reagents
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  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1914129
References
more
  • Summaries
    All 39
    Developmental Gene Expression 7
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory