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Rdh1
Gene Detail
 Symbol
Name
ID
Rdh1
retinol dehydrogenase 1 (all trans)
MGI:1195275
Feature Type protein coding gene
Genetic Map
Chromosome 10
75.21 cM, cytoband D3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr10:127759721-127768297 bp, + strand
From VEGA annotation of GRCm38

  8577 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:74505  Vertebrate Homology Class
5 mouse; 1 rat; 1 zebrafish

Protein SuperFamily: retinol dehydrogenase
Gene Tree: Rdh1

Alleles
and
phenotypes
All alleles(1) : Targeted(1)
 
Mice homozygous for a null allele exhibit increased body weight, adipose tissue, and retinol levels.
 
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process oxidation-reduction process, retinoid metabolic process, ...
Function retinol dehydrogenase activity, steroid dehydrogenase activity
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (5)    Tissues (5)    Images (2)
Theiler Stages: 9, 11, 13, 15, 28
Assay TypeResults
RT-PCR 5
cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(6) cDNA(4) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000027662 (Evidence)
Ensembl Gene ModelENSMUSG00000089789 (Evidence)
Entrez Gene107605 (Evidence)
UniGene484271
DFCITC1599785
DoTSDT.97394999
NIA Mouse Gene IndexU335256
Consensus CDS ProjectCCDS24250.1
International Mouse Knockout Project StatusRdh1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027662 VEGA Gene Model | MGI Sequence Detail 8577 C57BL/6J ±  kb
transcript OTTMUST00000068444 VEGA | MGI Sequence Detail 3930 Not Applicable 
polypeptide OTTMUSP00000034612 VEGA | MGI Sequence Detail 317 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(69 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002347 Glucose/ribitol dehydrogenase
InterPro IPR016040 NAD(P)-binding domain
InterPro IPR020904 Short-chain dehydrogenase/reductase, conserved site
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR
References (Earliest) J:44704 Driessen CA, et al., Cloning and structural analysis of the murine GCN5L1 gene. Gene. 1997 Dec 5;203(1):27-31
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory