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Fxyd2 Gene Detail
Summary
  • Symbol
    Fxyd2
  • Name
    FXYD domain-containing ion transport regulator 2
  • Synonyms
    Atp1g1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1195260
    NCBI Gene: 11936
  • Gene Overview
    MyGene.info: FXYD2
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:45399709-45410278 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 24.84 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    167 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1195260
 protein coding gene Chr9:45399669-45410278 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034738
 protein coding gene Chr9:43962219-43969445 (+)
A/J MGP_AJ_G0034719
 protein coding gene Chr9:42737030-42744199 (+)
AKR/J MGP_AKRJ_G0034646
 protein coding gene Chr9:43611845-43619132 (+)
BALB/cJ MGP_BALBcJ_G0034710
 protein coding gene Chr9:42464394-42471538 (+)
C3H/HeJ MGP_C3HHeJ_G0034421
 protein coding gene Chr9:44069152-44076292 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035231
 protein coding gene Chr9:45250375-45257522 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032145
 protein coding gene Chr9:42281967-42289108 (+)
CAST/EiJ MGP_CASTEiJ_G0033743
 protein coding gene Chr9:43929865-43937077 (+)
CBA/J MGP_CBAJ_G0034393
 protein coding gene Chr9:46909499-46916646 (+)
DBA/2J MGP_DBA2J_G0034552
 protein coding gene Chr9:42618914-42626058 (+)
FVB/NJ MGP_FVBNJ_G0034493
 protein coding gene Chr9:41880942-41888578 (+)
LP/J MGP_LPJ_G0034633
 protein coding gene Chr9:44268517-44275747 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034537
 protein coding gene Chr9:48708543-48715687 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035252
 protein coding gene Chr9:43534898-43542040 (+)
PWK/PhJ MGP_PWKPhJ_G0033448
 protein coding gene Chr9:42509220-42516435 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033284
 protein coding gene Chr9:43836162-43840329 (+)
WSB/EiJ MGP_WSBEiJ_G0033856
 protein coding gene Chr9:43564850-43572037 (+)



Homology
more
  • Human Ortholog
    FXYD2, FXYD domain containing ion transport regulator 2
  • Human Ortholog
    FXYD2, FXYD domain containing ion transport regulator 2
    Orthology source: HGNC
  • Synonyms
    ATP1G1, HOMG2
  • Links
    NCBI Gene ID: 486
    neXtProt AC: NX_P54710
    UniProt: P54710

  • Chr Location
    11q23.3; chr11:117820075-117828092 (-)  GRCh38.p7
  • HCOP
    human homology predictions: FXYD2
  • Gene Tree
    Fxyd2
Human Diseases
more
  • Diseases
    1 with human FXYD2 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Homozygous null mice are viable and fertile but display abnormal renal NaK-ATPase kinetics.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    130
  • Tissues
    73
  • cDNA Data
    194
  • Literature Summary
    8
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 11936 NCBI Gene Model | MGI Sequence Detail 10570 C57BL/6J ±  kb
transcript NR_028499 RefSeq | MGI Sequence Detail 773 C57BL/6  
polypeptide Q04646 UniProt | EBI | MGI Sequence Detail 70 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 198
    cDNA 195
    Primer pair 3

    Microarray probesets 5
References
more
  • Summaries
    All 39
    Developmental Gene Expression 8
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:39176 Mercer RW, et al., Molecular cloning and immunological characterization of the gamma polypeptide, a small protein associated with the Na,K-ATPase. J Cell Biol. 1993 May;121(3):579-86
  • Latest
    J:231595 Gurdziel K, et al., Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun. Dev Dyn. 2016 May;245(5):614-26
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/03/2019
MGI 6.14 		The Jackson Laboratory