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Fabp9 Gene Detail
Summary
  • Symbol
    Fabp9
  • Name
    fatty acid binding protein 9, testis
  • Synonyms
    1700007P10Rik, Tlbp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1194881
    NCBI Gene: 21884
  • Gene Overview
    MyGene.info: FABP9
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:10193623-10197283 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 2.55 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1194881
protein coding gene Chr3:10193621-10197283 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027062
protein coding gene Chr3:7159405-7163077 (-)
A/J MGP_AJ_G0027026
protein coding gene Chr3:7320576-7324238 (-)
AKR/J MGP_AKRJ_G0026996
protein coding gene Chr3:7219852-7223524 (-)
BALB/cJ MGP_BALBcJ_G0027035
protein coding gene Chr3:7016294-7019956 (-)
C3H/HeJ MGP_C3HHeJ_G0026775
protein coding gene Chr3:7525481-7529143 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027479
protein coding gene Chr3:7796318-7799980 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024841
protein coding gene Chr3:6199687-6203373 (-)
CAST/EiJ MGP_CASTEiJ_G0026233
protein coding gene Chr3:7548459-7552177 (-)
CBA/J MGP_CBAJ_G0026753
protein coding gene Chr3:7806959-7810621 (-)
DBA/2J MGP_DBA2J_G0026889
protein coding gene Chr3:6882694-6886356 (-)
FVB/NJ MGP_FVBNJ_G0026856
protein coding gene Chr3:6811277-6814949 (-)
LP/J MGP_LPJ_G0026999
protein coding gene Chr3:7681557-7685229 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026877
protein coding gene Chr3:8831924-8835586 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027539
protein coding gene Chr3:7081020-7084682 (-)
PWK/PhJ MGP_PWKPhJ_G0025968
protein coding gene Chr3:7110997-7114670 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025771
protein coding gene Chr3:7222850-7226507 (-)
WSB/EiJ MGP_WSBEiJ_G0026304
protein coding gene Chr3:7110728-7114399 (-)



Homology
more
  • Human Ortholog
    FABP9, fatty acid binding protein 9
  • Vertebrate Orthologs
    7
  • Human Ortholog
    FABP9, fatty acid binding protein 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PERF, PERF15, T-FABP, TLBP
  • Links
    NCBI Gene ID: 646480
    neXtProt AC: NX_Q0Z7S8
    UniProt: Q0Z7S8

  • Chr Location
    8q21.13; chr8:81458383-81461523 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit sperm head abnormalities without altering fertility.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 21884 NCBI Gene Model | MGI Sequence Detail 3661 C57BL/6J ±  kb
transcript NM_011598 RefSeq | MGI Sequence Detail 661 C57BL/6  
polypeptide O08716 UniProt | EBI | MGI Sequence Detail 132 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR012674 Calycin
    IPR000463 Cytosolic fatty-acid binding
    IPR031259 Intracellular lipid binding protein
    IPR000566 Lipocalin/cytosolic fatty-acid binding domain
Molecular
Reagents
less
  • All nucleic 163
    cDNA 163

    Microarray probesets 5
Other
Accession IDs
less
MGI:1917230
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:44460 Korley R, et al., Analysis of the protein composition of the mouse sperm perinuclear theca and characterization of its major protein constituent. Biol Reprod. 1997 Dec;57(6):1426-32
  • Latest
    J:166942 Selvaraj V, et al., Mice lacking FABP9/PERF15 develop sperm head abnormalities but are fertile. Dev Biol. 2010 Dec 15;348(2):177-89

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory