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Cdr2 Gene Detail
Summary
  • Symbol
    Cdr2
  • Name
    cerebellar degeneration-related 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1100885
    NCBI Gene: 12585
  • Gene Overview
    MyGene.info: CDR2
Location & Maps
more
  • Sequence Map
    Chr7:120957036-120982312 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      25277 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 65.04 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CDR2, cerebellar degeneration related protein 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CDR2, cerebellar degeneration related protein 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CDR62, Yo
  • Links
    NCBI Gene ID: 1039
    neXtProt AC: NX_Q01850

  • Chr Location
    16p12.3; chr16:22345936-22374617 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 7262
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CDR2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    1
  • Targeted
    4
  • Incidental Mutations
Mice homozygous for a reporter allele are viable, fertile, and overtly normal.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027358 VEGA Gene Model | MGI Sequence Detail 25277 C57BL/6J ±  kb
transcript OTTMUST00000067651 VEGA | MGI Sequence Detail 2525 Not Applicable  
polypeptide OTTMUSP00000034073 VEGA | MGI Sequence Detail 455 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    174 from dbSNP Build 142
  • RFLP
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000005284 cerebellar degeneration-related protein 2
  • InterPro Domains
    IPR026079 Cerebellar degeneration-related protein 2
Molecular
Reagents
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  • All nucleic 87
    cDNA 87

    Microarray probesets 3
Other
Accession IDs
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MGI:2141845
References
more
  • Summaries
    All 28
    Developmental Gene Expression 4
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:40255 Fletcher CF, et al., Mouse chromosomal locations of nine genes encoding homologs of human paraneoplastic neurologic disorder antigens. Genomics. 1997 Oct 15;45(2):313-9
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory