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Dhx15 Gene Detail
Summary
  • Symbol
    Dhx15
  • Name
    DEAH (Asp-Glu-Ala-His) box polypeptide 15
  • Synonyms
    DBP1, Ddx15, HRH2, mDEAH9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1099786
    NCBI Gene: 13204
  • Gene Overview
    MyGene.info: DHX15
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:52150203-52190514 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 27.51 cM, cytoband C1
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    185 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1099786
protein coding gene Chr5:52150203-52190546 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029543
protein coding gene Chr5:51107592-51149208 (-)
A/J MGP_AJ_G0029511
protein coding gene Chr5:49322780-49363088 (-)
AKR/J MGP_AKRJ_G0029459
protein coding gene Chr5:50989720-51030296 (-)
BALB/cJ MGP_BALBcJ_G0029520
protein coding gene Chr5:49789176-49829336 (-)
C3H/HeJ MGP_C3HHeJ_G0029243
protein coding gene Chr5:51164186-51204325 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029974
protein coding gene Chr5:53247038-53289825 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027214
protein coding gene Chr5:46102967-46144880 (-)
CAST/EiJ MGP_CASTEiJ_G0028651
protein coding gene Chr5:50155725-50196892 (-)
CBA/J MGP_CBAJ_G0029212
protein coding gene Chr5:54878450-54918513 (-)
DBA/2J MGP_DBA2J_G0029358
protein coding gene Chr5:49382916-49423427 (-)
FVB/NJ MGP_FVBNJ_G0029318
protein coding gene Chr5:48724628-48767003 (-)
LP/J MGP_LPJ_G0029443
protein coding gene Chr5:51572672-51612967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029346
protein coding gene Chr5:55989690-56031118 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030007
protein coding gene Chr5:50490608-50530902 (-)
PWK/PhJ MGP_PWKPhJ_G0028375
protein coding gene Chr5:48443697-48484770 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028209
protein coding gene Chr5:49923347-49968360 (-)
WSB/EiJ MGP_WSBEiJ_G0028732
protein coding gene Chr5:50530794-50571088 (-)



Homology
more
  • Human Ortholog
    DHX15, DEAH-box helicase 15
  • Vertebrate Orthologs
    10
  • Human Ortholog
    DHX15, DEAH-box helicase 15
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DBP1, DDX15, HRH2, PRP43, PRPF43, PrPp43p
  • Links
    NCBI Gene ID: 1665
    neXtProt AC: NX_O43143
    UniProt: O43143

  • Chr Location
    4p15.2; chr4:24527464-24584603 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 1040
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: DHX15
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029169 Ensembl Gene Model | MGI Sequence Detail 40312 C57BL/6J ±  kb
transcript ENSMUST00000031061 Ensembl | MGI Sequence Detail 3010 Not Applicable  
polypeptide ENSMUSP00000031061 Ensembl | MGI Sequence Detail 795 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 290
    cDNA 290

    Microarray probesets 4
References
more
  • Summaries
    All 56
    Developmental Gene Expression 3
    Gene Ontology 8
    Phenotypes 24
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:256883 Zhou J, et al., Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system. Biochim Biophys Acta. 2017 Dec;1860(12):1159-1168

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory