About   Help   FAQ
Commd2 Gene Detail
Summary
  • Symbol
    Commd2
  • Name
    COMM domain containing 2
  • Synonyms
    1190017G07Rik, D3Ertd176e, HSPC042
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098806
    NCBI Gene: 52245
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:57644349-57651684 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 27.94 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098806
protein coding gene Chr3:57644349-57651715 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027230
protein coding gene Chr3:56444050-56452022 (-)
A/J MGP_AJ_G0027190
protein coding gene Chr3:54692538-54701085 (-)
AKR/J MGP_AKRJ_G0027160
protein coding gene Chr3:55828582-55835773 (-)
BALB/cJ MGP_BALBcJ_G0027203
protein coding gene Chr3:54519494-54526911 (-)
C3H/HeJ MGP_C3HHeJ_G0026946
protein coding gene Chr3:56017310-56026351 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027649
protein coding gene Chr3:58534923-58548604 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026398
protein coding gene Chr3:56182082-56190708 (-)
CBA/J MGP_CBAJ_G0026922
protein coding gene Chr3:60466672-60473793 (-)
DBA/2J MGP_DBA2J_G0027056
protein coding gene Chr3:54191907-54199226 (-)
FVB/NJ MGP_FVBNJ_G0027024
protein coding gene Chr3:53169360-53177705 (-)
LP/J MGP_LPJ_G0027168
protein coding gene Chr3:57187058-57195244 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027042
protein coding gene Chr3:64557597-64566161 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027707
protein coding gene Chr3:55760256-55768769 (-)
PWK/PhJ MGP_PWKPhJ_G0026130
protein coding gene Chr3:53843703-53851006 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025943
protein coding gene Chr3:55446798-55454839 (-)
WSB/EiJ MGP_WSBEiJ_G0026472
protein coding gene Chr3:55847363-55857733 (-)



Homology
more
  • Human Ortholog
    COMMD2, COMM domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    COMMD2, COMM domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSPC042
  • Links
    NCBI Gene ID: 51122
    neXtProt AC: NX_Q86X83
    UniProt: Q86X83

  • Chr Location
    3q25.1; chr3:149737160-149752507 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9381
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: COMMD2
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52245 NCBI Gene Model | MGI Sequence Detail 7336 C57BL/6J ±  kb
transcript NM_175095 RefSeq | MGI Sequence Detail 2961 C57BL/6  
polypeptide Q8BXC6 UniProt | EBI | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 68
    cDNA 67
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1916178, MGI:2147842
References
more
  • Summaries
    All 34
    Diseases 1
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2019
MGI 6.14
The Jackson Laboratory