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Commd2
Gene Detail
 Symbol
Name
ID
Commd2
COMM domain containing 2
MGI:1098806
Synonyms 1190017G07Rik, D3Ertd176e, HSPC042
Feature Type protein coding gene
Genetic Map
Chromosome 3
27.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:57642904-57651715 bp, - strand
From VEGA annotation of GRCm38

  8812 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9381  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Commd2

Human
homologs
Human Homolog COMMD2, COMM domain containing 2
NCBI Gene ID 51122
neXtProt AC  NX_Q86X83
Human Chr (Location)  3q25.1; chr3:149738470-149752500 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(2) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Commd2 interacts with 334 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(66)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(67) cDNA(66) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000029283 (Evidence)
Ensembl Gene ModelENSMUSG00000036513 (Evidence)
Entrez Gene52245 (Evidence)
UniGene21901
DFCITC1575879, TC1600778, TC1617165
DoTSDT.101382211, DT.493969
NIA Mouse Gene IndexU024073
Consensus CDS ProjectCCDS17362.1
International Mouse Knockout Project StatusCommd2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029283 VEGA Gene Model | MGI Sequence Detail 8812 C57BL/6J ±  kb
transcript OTTMUST00000072569 VEGA | MGI Sequence Detail 4415 Not Applicable 
polypeptide OTTMUSP00000037393 VEGA | MGI Sequence Detail 199 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(161 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017920 COMM domain
InterPro IPR009886 HCaRG
Protein Ontology PR:000031978 COMM domain-containing protein 2
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:1916178, MGI:2147842

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory