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Otud4 Gene Detail
Summary
  • Symbol
    Otud4
  • Name
    OTU domain containing 4
  • Synonyms
    4930431L18Rik, D8Ertd69e, mKIAA1046
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098801
    NCBI Gene: 73945
  • Gene Overview
    MyGene.info: OTUD4
Location & Maps
more
  • Sequence Map
    Chr8:79639618-79677724 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      38107 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 37.74 cM, cytoband C3
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    OTUD4, OTU deubiquitinase 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    OTUD4, OTU deubiquitinase 4
    Orthology source: HomoloGene
  • Synonyms
    DUBA6, HIN1, HSHIN1
  • Links
    NCBI Gene ID: 54726
    neXtProt AC: NX_Q01804

  • Chr Location
    4q31.21; chr4:145133650-145179973 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Targeted
    3
  • Genomic Mutations
    1 involving Otud4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037239 VEGA Gene Model | MGI Sequence Detail 38107 C57BL/6J ±  kb
transcript OTTMUST00000096036 VEGA | MGI Sequence Detail 7354 Not Applicable  
polypeptide OTTMUSP00000053619 VEGA | MGI Sequence Detail 1107 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    81 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 18
    Primer pair 1

    Microarray probesets 8
Other
Accession IDs
less
MGI:1921195, MGI:2138957
References
more
  • Summaries
    All 31
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory