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Szrd1 Gene Detail
Summary
  • Symbol
    Szrd1
  • Name
    SUZ RNA binding domain containing 1
  • Synonyms
    D4Ertd22e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098672
    NCBI Gene: 213491
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:141113001-141139775 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 73.38 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098672
protein coding gene Chr4:141112978-141139796 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029039
protein coding gene Chr4:144129801-144157155 (-)
A/J MGP_AJ_G0028998
protein coding gene Chr4:137874786-137903548 (-)
AKR/J MGP_AKRJ_G0028950
protein coding gene Chr4:141846393-141879161 (-)
BALB/cJ MGP_BALBcJ_G0029022
protein coding gene Chr4:138564028-138592251 (-)
C3H/HeJ MGP_C3HHeJ_G0028736
protein coding gene Chr4:142230797-142258847 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029463
protein coding gene Chr4:149175557-149209649 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026734
protein coding gene Chr4:130792283-130818595 (-)
CAST/EiJ MGP_CASTEiJ_G0028168
protein coding gene Chr4:140484994-140513969 (-)
CBA/J MGP_CBAJ_G0028700
protein coding gene Chr4:153473297-153505335 (-)
DBA/2J MGP_DBA2J_G0028850
protein coding gene Chr4:138270207-138296646 (-)
FVB/NJ MGP_FVBNJ_G0028817
protein coding gene Chr4:137375147-137402063 (-)
LP/J MGP_LPJ_G0028949
protein coding gene Chr4:144152151-144178731 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028843
protein coding gene Chr4:157327654-157357686 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029501
protein coding gene Chr4:142380716-142409606 (-)
PWK/PhJ MGP_PWKPhJ_G0027889
protein coding gene Chr4:135157652-135184987 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027714
protein coding gene Chr4:138199684-138226344 (-)
WSB/EiJ MGP_WSBEiJ_G0028246
protein coding gene Chr4:142662496-142691217 (-)



Homology
more
  • Human Ortholog
    SZRD1, SUZ RNA binding domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SZRD1, SUZ RNA binding domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf144
  • Links
    NCBI Gene ID: 26099
    neXtProt AC: NX_Q7Z422
    UniProt: Q7Z422

  • Chr Location
    1p36.13; chr1:16367030-16398148 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9213
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SZRD1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040842 Ensembl Gene Model | MGI Sequence Detail 26775 C57BL/6J ±  kb
transcript ENSMUST00000102487 Ensembl | MGI Sequence Detail 3244 Not Applicable  
polypeptide ENSMUSP00000099545 Ensembl | MGI Sequence Detail 152 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 95
    cDNA 94
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 34
    Phenotypes 14
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory