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Szrd1 Gene Detail
Summary
  • Symbol
    Szrd1
  • Name
    SUZ RNA binding domain containing 1
  • Synonyms
    D4Ertd22e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098672
    NCBI Gene: 213491
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:140840312-140867086 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 73.38 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098672
 protein coding gene Chr4:140840289-140867110 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029039
 protein coding gene Chr4:144129801-144157155 (-)
A/J MGP_AJ_G0028998
 protein coding gene Chr4:137874786-137903548 (-)
AKR/J MGP_AKRJ_G0028950
 protein coding gene Chr4:141846393-141879161 (-)
BALB/cJ MGP_BALBcJ_G0029022
 protein coding gene Chr4:138564028-138592251 (-)
C3H/HeJ MGP_C3HHeJ_G0028736
 protein coding gene Chr4:142230797-142258847 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029463
 protein coding gene Chr4:149175557-149209649 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026734
 protein coding gene Chr4:130792283-130818595 (-)
CAST/EiJ MGP_CASTEiJ_G0028168
 protein coding gene Chr4:140484994-140513969 (-)
CBA/J MGP_CBAJ_G0028700
 protein coding gene Chr4:153473297-153505335 (-)
DBA/2J MGP_DBA2J_G0028850
 protein coding gene Chr4:138270207-138296646 (-)
FVB/NJ MGP_FVBNJ_G0028817
 protein coding gene Chr4:137375147-137402063 (-)
LP/J MGP_LPJ_G0028949
 protein coding gene Chr4:144152151-144178731 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028843
 protein coding gene Chr4:157327654-157357686 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029501
 protein coding gene Chr4:142380716-142409606 (-)
PWK/PhJ MGP_PWKPhJ_G0027889
 protein coding gene Chr4:135157652-135184987 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027714
 protein coding gene Chr4:138199684-138226344 (-)
WSB/EiJ MGP_WSBEiJ_G0028246
 protein coding gene Chr4:142662496-142691217 (-)



Homology
more
  • Human Ortholog
    SZRD1, SUZ RNA binding domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SZRD1, SUZ RNA binding domain containing 1
  • Synonyms
    C1orf144
  • Links
    NCBI Gene ID: 26099
    neXtProt AC: NX_Q7Z422
    UniProt: Q7Z422

  • Chr Location
    1p36.13; chr1:16352575-16398145 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    81
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Gene trapped
    76
  • Targeted
    2
  • Genomic Mutations
    3 involving Szrd1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    55 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    94
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040842 Ensembl Gene Model | MGI Sequence Detail 26775 C57BL/6J ±  kb
transcript ENSMUST00000102487 Ensembl | MGI Sequence Detail 3244 Not Applicable  
polypeptide ENSMUSP00000099545 Ensembl | MGI Sequence Detail 152 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 95
    cDNA 94
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 36
    Phenotypes 15
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory