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Clk3 Gene Detail
Summary
  • Symbol
    Clk3
  • Name
    CDC-like kinase 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098670
    NCBI Gene: 102414
  • Gene Overview
    MyGene.info: CLK3
Location & Maps
more
  • Sequence Map
    Chr9:57750711-57765860 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      15150 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 31.47 cM, cytoband C
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CLK3, CDC like kinase 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CLK3, CDC like kinase 3
    Orthology source: HomoloGene
  • Synonyms
    PHCLK3, PHCLK3/152
  • Links
    NCBI Gene ID: 1198
    neXtProt AC: NX_P49761

  • Chr Location
    15q24; chr15:74598476-74645418 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032316 Ensembl Gene Model | MGI Sequence Detail 15150 C57BL/6J ±  kb
transcript ENSMUST00000065330 Ensembl | MGI Sequence Detail 2494 Not Applicable  
polypeptide ENSMUSP00000067341 Ensembl | MGI Sequence Detail 638 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    28 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 145
    cDNA 145

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143002
References
more
  • Summaries
    All 34
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:43003 Nayler O, et al., Characterization and comparison of four serine- and arginine-rich (SR) protein kinases. Biochem J. 1997 Sep 15;326(Pt 3):693-700
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory