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Clk3 Gene Detail
Summary
  • Symbol
    Clk3
  • Name
    CDC-like kinase 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098670
    NCBI Gene: 102414
  • Gene Overview
    MyGene.info: CLK3
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr9:57750709-57765860 bp, - strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      15152 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 31.47 cM, cytoband C
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CLK3, CDC like kinase 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CLK3, CDC like kinase 3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PHCLK3, PHCLK3/152
  • Links
    NCBI Gene ID: 1198
    neXtProt AC: NX_P49761
    UniProt: P49761

  • Chr Location
    15q24.1; chr15:74598476-74645418 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    22
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    77
  • Tissues
    16
  • cDNA Data
    145
  • Literature Summary
    4
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 102414 NCBI Gene Model | MGI Sequence Detail 15152 C57BL/6J ±  kb
transcript NM_007713 RefSeq | MGI Sequence Detail 2494 C57BL/6  
polypeptide O35492 UniProt | EBI | MGI Sequence Detail 638 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    28 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 146
    cDNA 146

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143002
References
more
  • Summaries
    All 36
    Developmental Gene Expression 4
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:43003 Nayler O, et al., Characterization and comparison of four serine- and arginine-rich (SR) protein kinases. Biochem J. 1997 Sep 15;326(Pt 3):693-700
  • Latest
    J:256883 Zhou J, et al., Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system. Biochim Biophys Acta. 2017 Dec;1860(12):1159-1168
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/11/2018
MGI 6.12 		The Jackson Laboratory