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Rbm34 Gene Detail
Summary
  • Symbol
    Rbm34
  • Name
    RNA binding motif protein 34
  • Synonyms
    4930547K05Rik, D8Ertd233e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098653
    NCBI Gene: 52202
  • Gene Overview
    MyGene.info: RBM34
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:126947172-126971071 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 74.64 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098653
protein coding gene Chr8:126947172-126971129 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034298
protein coding gene Chr8:130808847-130832737 (-)
A/J MGP_AJ_G0034277
protein coding gene Chr8:125382664-125406704 (-)
AKR/J MGP_AKRJ_G0034204
protein coding gene Chr8:128990174-129013958 (-)
BALB/cJ MGP_BALBcJ_G0034270
protein coding gene Chr8:125559180-125583044 (-)
C3H/HeJ MGP_C3HHeJ_G0033981
protein coding gene Chr8:129633999-129659279 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034790
protein coding gene Chr8:135120362-135147545 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031732
protein coding gene Chr8:118061750-118086335 (-)
CAST/EiJ MGP_CASTEiJ_G0033308
protein coding gene Chr8:129819908-129846803 (-)
CBA/J MGP_CBAJ_G0033955
protein coding gene Chr8:140153334-140182930 (-)
DBA/2J MGP_DBA2J_G0034110
protein coding gene Chr8:124498943-124523402 (-)
FVB/NJ MGP_FVBNJ_G0034055
protein coding gene Chr8:123729213-123753116 (-)
LP/J MGP_LPJ_G0034199
protein coding gene Chr8:130981916-131005766 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034101
protein coding gene Chr8:142047693-142074347 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034809
protein coding gene Chr8:129221270-129247074 (-)
PWK/PhJ MGP_PWKPhJ_G0033011
protein coding gene Chr8:124294890-124319270 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032849
protein coding gene Chr8:127867028-127895834 (-)
WSB/EiJ MGP_WSBEiJ_G0033426
protein coding gene Chr8:129969781-129995274 (-)



Homology
more
  • Human Ortholog
    RBM34, RNA binding motif protein 34
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RBM34, RNA binding motif protein 34
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 23029
    neXtProt AC: NX_P42696
    UniProt: P42696

  • Chr Location
    1q42.3; chr1:235131183-235161616 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033931 Ensembl Gene Model | MGI Sequence Detail 23900 C57BL/6J ±  kb
transcript ENSMUST00000045994 Ensembl | MGI Sequence Detail 3424 Not Applicable  
polypeptide ENSMUSP00000048450 Ensembl | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR034220 RBM34, RNA recognition motif 1
    IPR034221 RBM34, RNA recognition motif 2
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 19
    cDNA 16
    Primer pair 3

    Microarray probesets 5
Other
Accession IDs
less
MGI:1914899
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory