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Rragd Gene Detail
Summary
  • Symbol
    Rragd
  • Name
    Ras-related GTP binding D
  • Synonyms
    5730543C08Rik, C030003H22Rik, D4Ertd174e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098604
    NCBI Gene: 52187
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:32983037-33022180 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 14.57 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    257 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098604
protein coding gene Chr4:32982998-33022180 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028116
protein coding gene Chr4:30471352-30514530 (+)
A/J MGP_AJ_G0028074
protein coding gene Chr4:29382240-29422811 (+)
AKR/J MGP_AKRJ_G0028037
protein coding gene Chr4:30151419-30191068 (+)
BALB/cJ MGP_BALBcJ_G0028085
protein coding gene Chr4:29646558-29686118 (+)
C3H/HeJ MGP_C3HHeJ_G0027814
protein coding gene Chr4:30434431-30479174 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028527
protein coding gene Chr4:31666548-31711362 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025868
protein coding gene Chr4:27448416-27488105 (+)
CAST/EiJ MGP_CASTEiJ_G0027269
protein coding gene Chr4:30212418-30254977 (+)
CBA/J MGP_CBAJ_G0027786
protein coding gene Chr4:32700023-32743916 (+)
DBA/2J MGP_DBA2J_G0027930
protein coding gene Chr4:29387742-29427159 (+)
FVB/NJ MGP_FVBNJ_G0027896
protein coding gene Chr4:28810129-28851699 (+)
LP/J MGP_LPJ_G0028038
protein coding gene Chr4:30562412-30604185 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027929
protein coding gene Chr4:35266275-35308808 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028586
protein coding gene Chr4:30157545-30199891 (+)
PWK/PhJ MGP_PWKPhJ_G0026988
protein coding gene Chr4:29379821-29424832 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026817
protein coding gene Chr4:30041557-30085187 (+)
WSB/EiJ MGP_WSBEiJ_G0027345
protein coding gene Chr4:30156015-30198465 (+)



Homology
more
  • Human Ortholog
    RRAGD, Ras related GTP binding D
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RRAGD, Ras related GTP binding D
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA11D8.2.1, RAGD
  • Links
    NCBI Gene ID: 58528
    neXtProt AC: NX_Q9NQL2
    UniProt: Q9NQL2

  • Chr Location
    6q15; chr6:89363509-89412470 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028278 Ensembl Gene Model | MGI Sequence Detail 39144 C57BL/6J ±  kb
transcript ENSMUST00000029946 Ensembl | MGI Sequence Detail 5055 Not Applicable  
polypeptide ENSMUSP00000029946 Ensembl | MGI Sequence Detail 454 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR006762 Gtr1/RagA G protein
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR039400 RagC/D
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1917891, MGI:2140304
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory