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Ift81 Gene Detail
Summary
  • Symbol
    Ift81
  • Name
    intraflagellar transport 81
  • Synonyms
    Cdv1, CDV-1R
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098597
    NCBI Gene: 12589
  • Gene Overview
    MyGene.info: IFT81
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:122550204-122614518 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 62.44 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    360 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098597
protein coding gene Chr5:122540265-122614546 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030054
protein coding gene Chr5:126186333-126255431 (-)
A/J MGP_AJ_G0030019
protein coding gene Chr5:120960410-121025019 (-)
AKR/J MGP_AKRJ_G0029955
protein coding gene Chr5:124854656-124919416 (-)
BALB/cJ MGP_BALBcJ_G0030030
protein coding gene Chr5:122307558-122372986 (-)
C3H/HeJ MGP_C3HHeJ_G0029747
protein coding gene Chr5:125487064-125553275 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030483
protein coding gene Chr5:131038285-131124605 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027709
protein coding gene Chr5:115567504-115631379 (-)
CAST/EiJ MGP_CASTEiJ_G0029156
protein coding gene Chr5:124569518-124641220 (-)
CBA/J MGP_CBAJ_G0029717
protein coding gene Chr5:136176711-136248808 (-)
DBA/2J MGP_DBA2J_G0029867
protein coding gene Chr5:121017048-121081732 (-)
FVB/NJ MGP_FVBNJ_G0029823
protein coding gene Chr5:120012253-120076086 (-)
LP/J MGP_LPJ_G0029956
protein coding gene Chr5:126732720-126796478 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029854
protein coding gene Chr5:139914102-139983082 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030524
protein coding gene Chr5:124454882-124524906 (-)
PWK/PhJ MGP_PWKPhJ_G0028870
protein coding gene Chr5:119799547-119865187 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028707
protein coding gene Chr5:122152732-122225560 (-)
WSB/EiJ MGP_WSBEiJ_G0029231
protein coding gene Chr5:125117276-125183651 (-)



Homology
more
  • Human Ortholog
    IFT81, intraflagellar transport 81
  • Vertebrate Orthologs
    10
  • Human Ortholog
    IFT81, intraflagellar transport 81
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CDV1, CDV-1, CDV1R, CDV-1R, DV1, SRTD19
  • Links
    NCBI Gene ID: 28981
    neXtProt AC: NX_Q8WYA0
    UniProt: Q8WYA0

  • Chr Location
    12q24.11; chr12:110124335-110218795 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 7664
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: IFT81
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human IFT81 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029469 Ensembl Gene Model | MGI Sequence Detail 64315 C57BL/6J ±  kb
transcript ENSMUST00000031426 Ensembl | MGI Sequence Detail 2950 Not Applicable  
polypeptide ENSMUSP00000031426 Ensembl | MGI Sequence Detail 676 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 46
    cDNA 46

    Microarray probesets 6
Other
Accession IDs
less
MGI:2141144
References
more
  • Summaries
    All 45
    Developmental Gene Expression 1
    Gene Ontology 9
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:240543 Xin D, et al., IFT56 regulates vertebrate developmental patterning by maintaining IFTB complex integrity and ciliary microtubule architecture. Development. 2017 Apr 15;144(8):1544-1553

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory