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Rps5
Gene Detail
 Symbol
Name
ID
Rps5
ribosomal protein S5
MGI:1097682
Synonyms S5 ribosomal protein
Feature Type protein coding gene
Genetic Map
Chromosome 7
7.69 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:12922290-12926686 bp, + strand
From VEGA annotation of GRCm38

  4397 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:783  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Protein SuperFamily: ribosomal protein, S7p/S7a/S5e/organellar S7 types
Gene Tree: Rps5

Human
homologs
Human Homolog RPS5, ribosomal protein S5
NCBI Gene ID 6193
neXtProt AC  NX_P46782
Human Synonyms  S5
Human Chr (Location)  19q13.4; chr19:58387269-58394804 (+)  GRCh38
Alleles
and
phenotypes
All alleles(47) : Gene trapped(43) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process regulation of translational fidelity, translation
Component cytosolic small ribosomal subunit, extracellular vesicular exosome, ...
Function mRNA binding, poly(A) RNA binding, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (204)    Tissues (63)    Images (2)
Theiler Stages: 13, 15, 17, 20, 22, 26, 28
Assay TypeResults
RNA in situ 188
RT-PCR 16
cDNA source data(1063)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(1064) cDNA(1063) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000023212 (Evidence)
Ensembl Gene ModelENSMUSG00000012848 (Evidence)
Entrez Gene20103 (Evidence)
UniGene5291
DFCITC1573679
DoTSDT.101175047, DT.101209547, DT.101315131, DT.101315143, DT.101741205, DT.94397065
NIA Mouse Gene IndexU007680
Consensus CDS ProjectCCDS20817.1
International Mouse Knockout Project StatusRps5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023212 VEGA Gene Model | MGI Sequence Detail 4397 C57BL/6J ±  kb
transcript OTTMUST00000056175 VEGA | MGI Sequence Detail 794 Not Applicable 
polypeptide OTTMUSP00000026966 VEGA | MGI Sequence Detail 204 Not Applicable 

For the selected sequences
All sequences(75) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(70 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000235 Ribosomal protein S5/S7
InterPro IPR005716 Ribosomal protein S5/S7, eukaryotic/archaeal
InterPro IPR020606 Ribosomal protein S7, conserved site
InterPro IPR023798 Ribosomal protein S7 domain
Protein Ontology PR:000014280 40S ribosomal protein S5
References (Earliest) J:40931 Vanegas N, et al., Cloning, sequencing and expression in MEL cells of a cDNA encoding the mouse ribosomal protein S5. Biochim Biophys Acta. 1997 Jun 5;1357(1):1-4
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(43)
Other
accession IDs
MGI:2145925

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory