Tex264 Gene Detail

Summary

• Symbol
  Tex264
• Name
  testis expressed gene 264
• Synonyms
  TEG-264

• Feature Type
  protein coding gene
• IDs
  MGI:1096570
  NCBI Gene: 21767
• Alliance
  gene page
• Transcription Start Sites
  14 TSS

Location &
Maps

• Sequence Map
  Chr9:106658746-106685927 bp, - strand
• From Ensembl annotation of GRCm38
  

  View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 57.98 cM, cytoband F1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  239 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1096570	protein coding gene	Chr9:106658746-106685952 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0035242	protein coding gene	Chr9:108476309-108504964 (-)
A/J	MGP_AJ_G0035221	protein coding gene	Chr9:104544114-104571223 (-)
AKR/J	MGP_AKRJ_G0035153	protein coding gene	Chr9:107152134-107178982 (-)
BALB/cJ	MGP_BALBcJ_G0035215	protein coding gene	Chr9:104231669-104259473 (-)
C3H/HeJ	MGP_C3HHeJ_G0034925	protein coding gene	Chr9:107568108-107595806 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0035735	protein coding gene	Chr9:111466913-111493905 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032633	protein coding gene	Chr9:102031156-102058018 (-)
CAST/EiJ	MGP_CASTEiJ_G0034236	protein coding gene	Chr9:107485597-107512800 (-)
CBA/J	MGP_CBAJ_G0034893	protein coding gene	Chr9:115419692-115449598 (-)
DBA/2J	MGP_DBA2J_G0035054	protein coding gene	Chr9:104009407-104036401 (-)
FVB/NJ	MGP_FVBNJ_G0035002	protein coding gene	Chr9:102788956-102815912 (-)
LP/J	MGP_LPJ_G0035130	protein coding gene	Chr9:108689706-108716809 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035041	protein coding gene	Chr9:116992376-117019540 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035756	protein coding gene	Chr9:107414567-107441730 (-)
PWK/PhJ	MGP_PWKPhJ_G0033943	protein coding gene	Chr9:104312631-104345572 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0033778	protein coding gene	Chr9:107488929-107518482 (-)
WSB/EiJ	MGP_WSBEiJ_G0034357	protein coding gene	Chr9:107317076-107345500 (-)

Homology

• Human Ortholog
  TEX264, testis expressed 264

• Vertebrate Orthologs
  10

• Human Ortholog
  TEX264, testis expressed 264
  Orthology source: HomoloGene, HGNC
• Synonyms
  ZSIG11
• Links
  HGNC:30247

  NCBI Gene ID: 51368

  neXtProt AC: NX_Q9Y6I9

  UniProt: Q9Y6I9

  
  
• Chr Location
  3p21.2; chr3:51671175-51704323 (+)  GRCh38.p7

---

• HomoloGene
  Vertebrate Homology Class 7975
  1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  
• HCOP
  human homology predictions: TEX264
• Gene Tree
  Tex264
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  24
• Gene trapped
  22
• Targeted
  2
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  27 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  89
• Literature Summary
  1

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas
• Other Vertebrate Links
  Xenbase tex264
  ZFIN tex264a

Interactions

• Tex264 interacts with 72 markers (Mir7-2, Mir7b, Mir29b-1, ...) View All

Sequences &
Gene Models

• All Sequences
  64
• RefSeq
  7
• UniProt
  5
• CCDS
  CCDS23483.1
• UniGene
  22266

• Ensembl
  ENSMUSG00000040813 (Evidence)
• NCBI Gene
  21767

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000040813	Ensembl Gene Model | MGI Sequence Detail	27182	C57BL/6J
transcript	ENSMUST00000169068	Ensembl | MGI Sequence Detail	1364	Not Applicable
polypeptide	ENSMUSP00000133194	Ensembl | MGI Sequence Detail	309	Not Applicable

Protein
Information

• UniProt
  5 Sequences
• InterPro Domains
  IPR011256 Regulatory factor, effector binding domain superfamily

Molecular
Reagents

• All nucleic 89

  cDNA 89

  
  

  Microarray probesets 4

References

• Summaries
  All 30

  Developmental Gene Expression 1

  Phenotypes 7
• Earliest
  J:35463 Lopez-Fernandez LA, et al., Characterization of genes expressed early in mouse spermatogenesis, isolated from a subtractive cDNA library. Mamm Genome. 1996 Sep;7(9):698-700
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Tex264:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91348	Chr9:106685892-106685961 (-)	0 bp
Tssr91347	Chr9:106685868-106685890 (-)	48 bp
Tssr91346	Chr9:106685808-106685824 (-)	111 bp
Tssr91345	Chr9:106685762-106685790 (-)	151 bp
Tssr91344	Chr9:106685741-106685752 (-)	180 bp
Tssr91343	Chr9:106685702-106685728 (-)	212 bp
Tssr91342	Chr9:106685653-106685674 (-)	263 bp
Tssr91341	Chr9:106685367-106685385 (-)	551 bp
Tssr91340	Chr9:106685325-106685363 (-)	583 bp
Tssr91339	Chr9:106685303-106685320 (-)	615 bp
Tssr91338	Chr9:106682360-106682364 (-)	3,565 bp
Tssr91337	Chr9:106682236-106682249 (-)	3,684 bp
Tssr91336	Chr9:106682199-106682214 (-)	3,720 bp
Tssr91335	Chr9:106682170-106682185 (-)	3,749 bp