Galr1
Gene Detail

Symbol Name ID

Galr1 galanin receptor 1 MGI:1096364

Synonyms

Galnr1

Feature Type

protein coding gene

Genetic Map

Chromosome 18

55.78 cM, cytoband E3-E4
Detailed Genetic Map ± 1 cM


Mapping data(6)

Sequence Map

Chr18:82392496-82406777 bp, - strand From NCBI annotation of GRCm38   14282 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Galr1 ± 2 cM)

Protein SuperFamily: galanin receptor
Gene Tree: Galr1

Human ortholog

GALR1 galanin receptor 1 NCBI Gene ID 2587
Human Synonyms: GALNR, GALNR1
Human Chr18:74962008-74982098 bp, + strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(2) : Targeted(2)
 

Homozygous mutation of this gene does not appear to result in a phenotype.

 

Gene Ontology (GO) classifications

All GO classifications: (16 annotations)

Process	adenylate cyclase-activating G-protein coupled receptor signaling pathway, G-protein coupled receptor signaling pathway, ...
Component	integral to membrane, membrane, ...
Function	galanin receptor activity, G-protein coupled receptor activity, ...

External Resources: FuncBase

Expression

Literature Summary: (5 records)
Data Summary: Results (102)    Tissues (51)    Images (12)
Theiler Stages: 23, 28

Assay Type	Results
RNA in situ	14
In situ reporter (knock in)	50
RT-PCR	38

cDNA source data(6)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress

Molecular reagents

All nucleic(12) Genomic(2) cDNA(7) Primer pair(1) Other(2)
Microarray probesets(4)

Other database links

Ensembl Gene Model	ENSMUSG00000024553 (Evidence)
Entrez Gene	14427 (Evidence)
UniGene	6219
DFCI	TC1591802, TC1651929
DoTS	DT.87058890, DT.91354952
NIA Mouse Gene Index	U038619
Consensus CDS Project	CCDS29372.1
International Mouse Knockout Project Status	Galr1

Sequences

Length	Strain/Species
genomic	14427	NCBI Gene Model | MGI Sequence Detail	14282	C57BL/6J
transcript	NM_008082	RefSeq | MGI Sequence Detail	2871	C57BL/6
polypeptide	P56479	UniProt | EBI | MGI Sequence Detail	348	Not Applicable

All sequences(22) RefSeq(2) UniProt(1)

Polymorphisms

RFLP(1) : SNPs(13 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR003906	Galanin 1 receptor
InterPro	IPR000405	Galanin receptor
InterPro	IPR000276	GPCR, rhodopsin-like
InterPro	IPR017452	GPCR, rhodopsin-like, 7TM
Protein Ontology	PR:000001585	galanin receptor 1

Graphical View of Protein Domain Structure

References

(Earliest) J:38577 Simoneaux DK, et al., Galanin receptor gene (Galnr1) is tightly linked to the myelin basic protein gene on Chromosome 18 in mouse. Mamm Genome. 1997;8(Nov):875
(Latest) J:185665 Guo Z, et al., Tlx1/3 and ptf1a control the expression of distinct sets of transmitter and Peptide receptor genes in the developing dorsal spinal cord. J Neurosci. 2012 Jun 20;32(25):8509-20
All references(54)