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Hn1 Gene Detail
Summary
  • Symbol
    Hn1
  • Name
    hematological and neurological expressed sequence 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1096361
    NCBI Gene: 15374
  • Gene Overview
    MyGene.info: HN1
Location & Maps
more
  • Sequence Map
    Chr11:115497353-115514387 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      17035 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.84 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    HN1, hematological and neurological expressed 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    HN1, hematological and neurological expressed 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ARM2, HN1A
  • Links
    NCBI Gene ID: 51155
    neXtProt AC: NX_Q9UK76

  • Chr Location
    17q25.1; chr17:75135243-75154683 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 7364
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;2 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: HN1
  • Gene Tree
    Hn1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    60
  • Endonuclease-mediated
    1
  • Gene trapped
    55
  • Targeted
    4
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003443 VEGA Gene Model | MGI Sequence Detail 17035 C57BL/6J ±  kb
transcript OTTMUST00000007275 VEGA | MGI Sequence Detail 1375 Not Applicable  
polypeptide OTTMUSP00000003503 VEGA | MGI Sequence Detail 154 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    135 from dbSNP Build 142
  • RFLP
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000008650 hematological and neurological expressed 1 protein
  • InterPro Domains
    IPR033335 Microtubule-associated protein Jupiter/Hematological and neurological expressed 1
Molecular
Reagents
less
  • All nucleic 299
    cDNA 299

    Microarray probesets 4
References
more
  • Summaries
    All 35
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:37358 Tang W, et al., Murine Hn1 on chromosome 11 is expressed in hemopoietic and brain tissues. Mamm Genome. 1997 Sep;8(9):695-6
  • Latest
    J:210222 Hupe M, et al., Evaluation of TRAP-sequencing technology with a versatile conditional mouse model. Nucleic Acids Res. 2014 Jan;42(2):e14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory