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S100a13 Gene Detail
Summary
  • Symbol
    S100a13
  • Name
    S100 calcium binding protein A13
  • Feature Type
    protein coding gene
  • IDs
    MGI:109581
    NCBI Gene: 20196
  • Gene Overview
    MyGene.info: S100A13
Location & Maps
more
  • Sequence Map
    Chr3:90514435-90524581 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10147 bp   ±  kb flank

  • Genome Browsers
Homology
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  • Human Ortholog
    S100A13, S100 calcium binding protein A13
  • Vertebrate Orthologs
    7
  • Human Ortholog
    S100A13, S100 calcium binding protein A13
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 6284
    neXtProt AC: NX_Q99584

  • Chr Location
    1q21; chr1:153618799-153634092 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    26
  • Chemically induced (other)
    1
  • Gene trapped
    22
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving S100a13
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022110 VEGA Gene Model | MGI Sequence Detail 10147 C57BL/6J ±  kb
transcript OTTMUST00000052486 VEGA | MGI Sequence Detail 715 Not Applicable  
polypeptide OTTMUSP00000024894 VEGA | MGI Sequence Detail 160 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    15 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 44
    Genomic 2
    cDNA 42

    Microarray probesets 6
Other
Accession IDs
less
MGD-MRK-39580
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:36095 Wicki R, et al., Characterization of the human and mouse cDNAs coding for S100A13, a new member of the S100 protein family. Biochem Biophys Res Commun. 1996 Oct 14;227(2):594-9
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
04/26/2016
MGI 6.03
The Jackson Laboratory