S100a13
Gene Detail

Symbol Name ID

S100a13 S100 calcium binding protein A13 MGI:109581

Feature Type

protein coding gene

Genetic Map

Chromosome 3

39.24 cM, cytoband F1-F2
Detailed Genetic Map ± 1 cM


Mapping data(6)

Sequence Map

Chr3:90514435-90524581 bp, + strand From VEGA annotation of GRCm38   10147 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:7523  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken

Protein SuperFamily: S-100 protein
Gene Tree: S100a13

Human homologs

Human Homolog		S100A13, S100 calcium binding protein A13
NCBI Gene ID		6284
neXtProt AC		NX_Q99584
Human Chr (Location)		1q21; chr1:153591275-153606568 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(24) : Targeted(2) Gene trapped(22)

Gene Ontology (GO) classifications

All GO classifications: (22 annotations)

Process	cytokine secretion, interleukin-1 alpha secretion, ...
Component	cytoplasm, cytosol, ...
Function	calcium ion binding, copper ion binding, ...

This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase

Expression

Literature Summary: (2 records)
cDNA source data(43)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(45) Genomic(2) cDNA(43)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000022110 (Evidence)
Ensembl Gene Model	ENSMUSG00000042312 (Evidence)
Entrez Gene	20196 (Evidence)
UniGene	6523
DFCI	TC1581516
DoTS	DT.101256007, DT.492883
NIA Mouse Gene Index	U003496
PDB	2CXJ
Consensus CDS Project	CCDS38504.1
International Mouse Knockout Project Status	S100a13

Sequences

Length	Strain/Species
genomic	OTTMUSG00000022110	VEGA Gene Model | MGI Sequence Detail	10147	C57BL/6J
transcript	OTTMUST00000052486	VEGA | MGI Sequence Detail	715	Not Applicable
polypeptide	OTTMUSP00000024894	VEGA | MGI Sequence Detail	98	Not Applicable

All sequences(26) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(4 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR011992	EF-hand-like domain
InterPro	IPR013787	S100/CaBP-9k-type, calcium binding, subdomain
Protein Ontology	PR:000014406	protein S100-A13

References

(Earliest) J:36095 Wicki R, et al., Characterization of the human and mouse cDNAs coding for S100A13, a new member of the S100 protein family. Biochem Biophys Res Commun. 1996 Oct 14;227(2):594-9
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(37)

Other accession IDs

MGD-MRK-39580