About   Help   FAQ
Cdh12 Gene Detail
Summary
  • Symbol
    Cdh12
  • Name
    cadherin 12
  • Synonyms
    Br-cadherin
  • Feature Type
    protein coding gene
  • IDs
    MGI:109503
    NCBI Gene: 215654
  • Gene Overview
    MyGene.info: CDH12
Location & Maps
more
  • Sequence Map
    Chr15:21111452-21589533 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      478082 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 8.25 cM
Homology
more
  • Human Ortholog
    CDH12, cadherin 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CDH12, cadherin 12
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CDHB
  • Links
    NCBI Gene ID: 1010
    neXtProt AC: NX_P55289

  • Chr Location
    5p14.3; chr5:21750864-22853622 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Cdh12
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025013 VEGA Gene Model | MGI Sequence Detail 478082 C57BL/6J ±  kb
transcript OTTMUST00000061573 VEGA | MGI Sequence Detail 5639 Not Applicable  
polypeptide OTTMUSP00000030220 VEGA | MGI Sequence Detail 794 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    2810 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 5
    Primer pair 2
    Other 1

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-39502
References
more
  • Summaries
    All 25
    Developmental Gene Expression 7
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:39330 Selig S, et al., Molecular characterization of Br-cadherin, a developmentally regulated, brain-specific cadherin. Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2398-403
  • Latest
    J:214586 Duan X, et al., Type II cadherins guide assembly of a direction-selective retinal circuit. Cell. 2014 Aug 14;158(4):793-807

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/17/2016
MGI 6.05
The Jackson Laboratory