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Snrp1c-ps1 Pseudogene Detail
Summary
  • Symbol
    Snrp1c-ps1
  • Name
    U1 small nuclear ribonucleoprotein 1C, pseudogene 1
  • Synonyms
    mC-[y]15
  • Feature Type
    pseudogene
  • IDs
    MGI:109488
    NCBI Gene: 20631
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:126723936-126724306 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 69.25 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109488
pseudogene Chr7:126723936-126724409 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014008
pseudogene Chr7:131015645-131016118 (+)
A/J MGP_AJ_G0014027
pseudogene Chr7:127547821-127548294 (+)
AKR/J MGP_AKRJ_G0013961
pseudogene Chr7:130779872-130780345 (+)
BALB/cJ MGP_BALBcJ_G0013984
pseudogene Chr7:127204739-127205212 (+)
C3H/HeJ MGP_C3HHeJ_G0013819
pseudogene Chr7:130716145-130716618 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014416
pseudogene Chr7:136113238-136113711 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012272
pseudogene Chr7:128742024-128742497 (+)
CAST/EiJ MGP_CASTEiJ_G0013474
pseudogene Chr7:122494349-122494822 (+)
CBA/J MGP_CBAJ_G0013799
pseudogene Chr7:140694752-140695225 (+)
DBA/2J MGP_DBA2J_G0013876
pseudogene Chr7:125523382-125523855 (+)
FVB/NJ MGP_FVBNJ_G0013877
pseudogene Chr7:125370373-125370846 (+)
LP/J MGP_LPJ_G0013955
pseudogene Chr7:132480866-132481339 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013903
pseudogene Chr7:141875296-141875769 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014382
pseudogene Chr7:129787635-129788108 (+)
PWK/PhJ MGP_PWKPhJ_G0013289
pseudogene Chr7:118515488-118515961 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013059
pseudogene Chr7:116633521-116633994 (+)
WSB/EiJ MGP_WSBEiJ_G0013536
pseudogene Chr7:130768738-130769211 (+)



Homology
less
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 20631 NCBI Gene Model | MGI Sequence Detail 371 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
Other
Accession IDs
less
MGD-MRK-39487
References
more
  • Summaries
    All 20
    Diseases 2
    Phenotypes 14
  • Earliest
    J:37896 Nelissen RL, et al., Cloning and characterization of two processed pseudogenes and the cDNA for the murine U1 snRNP-specific protein C. Gene. 1997 Jan 15;184(2):273-8
  • Latest
    J:271893 Antoine MW, et al., Increased Excitation-Inhibition Ratio Stabilizes Synapse and Circuit Excitability in Four Autism Mouse Models. Neuron. 2019 Feb 20;101(4):648-661.e4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory