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Ly6f
Gene Detail
 Symbol
Name
ID
Ly6f
lymphocyte antigen 6 complex, locus F
MGI:109441
Feature Type protein coding gene
Genetic Map
Chromosome 15
34.29 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:75268421-75272234 bp, + strand
From NCBI annotation of GRCm38

  3814 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113718  Vertebrate Homology Class
7 mouse; 6 rat

Protein SuperFamily: Ly-6-like protein
Gene Tree: Ly6f

Alleles
and
phenotypes
All alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component anchored component of membrane, membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(2) Genomic(1) Other(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000022583 (Evidence)
Entrez Gene17071 (Evidence)
DFCITC1594232
DoTSDT.91429792
NIA Mouse Gene IndexU016346
Consensus CDS ProjectCCDS27543.1
International Mouse Knockout Project StatusLy6f
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 17071 NCBI Gene Model | MGI Sequence Detail 3814 C57BL/6J ±  kb
transcript NM_008530 RefSeq | MGI Sequence Detail 877 Not Specified 
polypeptide P35460 UniProt | EBI | MGI Sequence Detail 134 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(6) UniProt(1)
Polymorphisms SNPs within 2kb(60 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001526 CD59 antigen
InterPro IPR018363 CD59 antigen, conserved site
InterPro IPR016054 Ly-6 antigen / uPA receptor -like
Protein Ontology PR:000010027 lymphocyte antigen 6F
Graphical View of Protein Domain Structure
References (Earliest) J:12607 Fleming TJ, et al., Characterization of two novel Ly-6 genes. Protein sequence and potential structural similarity to alpha-bungarotoxin and other neurotoxins. J Immunol. 1993 Jun 15;150(12):5379-90
All references(18)
Other
accession IDs
MGD-MRK-38486

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory