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Ly6f Gene Detail
Summary
  • Symbol
    Ly6f
  • Name
    lymphocyte antigen 6 complex, locus F
  • Feature Type
    protein coding gene
  • IDs
    MGI:109441
    NCBI Gene: 17071
  • Member of
    Ly6 cluster
Location & Maps
more
  • Sequence Map
    Chr15:75268702-75272235 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3534 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 34.29 cM, cytoband E1
  • Mapping Data
    1 experiment
Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    3
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    5 involving Ly6f
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045190 VEGA Gene Model | MGI Sequence Detail 3534 C57BL/6J ±  kb
transcript OTTMUST00000118737 VEGA | MGI Sequence Detail 818 Not Applicable  
polypeptide OTTMUSP00000066255 VEGA | MGI Sequence Detail 134 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    76 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000010027 lymphocyte antigen 6F
  • InterPro Domains
    IPR018363 CD59 antigen, conserved site
    IPR016054 Ly-6 antigen/uPA receptor-like
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-38486
References
more
  • Summaries
    All 16
    Diseases 1
    Gene Ontology 1
    Phenotypes 22
  • Earliest
    J:12607 Fleming TJ, et al., Characterization of two novel Ly-6 genes. Protein sequence and potential structural similarity to alpha-bungarotoxin and other neurotoxins. J Immunol. 1993 Jun 15;150(12):5379-90

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory