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Ly6g
Gene Detail
 Symbol
Name
ID
Member of
Ly6g
lymphocyte antigen 6 complex, locus G
MGI:109440
Ly6 cluster
Synonyms Gr1, Gr-1, Ly-6G
Feature Type protein coding gene
Genetic Map
Chromosome 15
34.29 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:75155240-75159126 bp, + strand
From VEGA annotation of GRCm38

  3887 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113718  Vertebrate Homology Class
7 mouse; 6 rat

Protein SuperFamily: Ly-6-like protein
Gene Tree: Ly6g

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Radiation induced(1) Targeted(1)
Genomic Mutations involving Ly6g (1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Component anchored component of membrane, external side of plasma membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (4)    Tissues (1)   
Theiler Stages: 11
Assay TypeResults
Immunohistochemistry 4
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(1) Genomic(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000045113 (Evidence)
Ensembl Gene ModelENSMUSG00000022582 (Evidence)
Entrez Gene546644 (Evidence)
International Mouse Knockout Project StatusLy6g
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045113 VEGA Gene Model | MGI Sequence Detail 3887 C57BL/6J ±  kb
transcript OTTMUST00000118556 VEGA | MGI Sequence Detail 941 Not Applicable 
polypeptide OTTMUSP00000066177 VEGA | MGI Sequence Detail 134 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(9) UniProt(1)
Polymorphisms SNPs within 2kb(69 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001526 CD59 antigen
InterPro IPR018363 CD59 antigen, conserved site
InterPro IPR016054 Ly-6 antigen / uPA receptor -like
Protein Ontology PR:000002978 lymphocyte antigen 6G
References (Earliest) J:12607 Fleming TJ, et al., Characterization of two novel Ly-6 genes. Protein sequence and potential structural similarity to alpha-bungarotoxin and other neurotoxins. J Immunol. 1993 Jun 15;150(12):5379-90
(Latest) J:182738 Chhabra A, et al., Trophoblasts regulate the placental hematopoietic niche through PDGF-B signaling. Dev Cell. 2012 Mar 13;22(3):651-9
All references(29)
Other
accession IDs
MGD-MRK-38485

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory