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Ly6g
Gene Detail
 Symbol
Name
ID
Ly6g
lymphocyte antigen 6 complex, locus G
MGI:109440
Synonyms Gr1, Gr-1, Ly-6G
Feature Type protein coding gene
Genetic Map
Chromosome 15
34.29 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:75156693-75158739 bp, + strand
From Ensembl annotation of GRCm38

  2047 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113718  Vertebrate Homology Class
7 mouse; 6 rat

Protein SuperFamily: Ly-6-like protein
Gene Tree: Ly6g

Alleles
and
phenotypes
All alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Component anchored component of membrane, external side of plasma membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (4)    Tissues (1)   
Theiler Stages: 11
Assay TypeResults
Immunohistochemistry 4
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(1) Genomic(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000022582 (Evidence)
Entrez Gene546644 (Evidence)
International Mouse Knockout Project StatusLy6g
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022582 Ensembl Gene Model | MGI Sequence Detail 2047 C57BL/6J ±  kb
transcript ENSMUST00000023246 Ensembl | MGI Sequence Detail 336 Not Applicable 
polypeptide ENSMUSP00000023246 Ensembl | MGI Sequence Detail 111 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(9) UniProt(1)
Polymorphisms SNPs within 2kb(48 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001526 CD59 antigen
InterPro IPR018363 CD59 antigen, conserved site
InterPro IPR016054 Ly-6 antigen / uPA receptor -like
Protein Ontology PR:000002978 lymphocyte antigen 6G
References (Earliest) J:12607 Fleming TJ, et al., Characterization of two novel Ly-6 genes. Protein sequence and potential structural similarity to alpha-bungarotoxin and other neurotoxins. J Immunol. 1993 Jun 15;150(12):5379-90
(Latest) J:182738 Chhabra A, et al., Trophoblasts regulate the placental hematopoietic niche through PDGF-B signaling. Dev Cell. 2012 Mar 13;22(3):651-9
All references(28)
Other
accession IDs
MGD-MRK-38485

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory