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Cebpz
Gene Detail
 Symbol
Name
ID
Cebpz
CCAAT/enhancer binding protein zeta
MGI:109386
Synonyms Cbf, CBF2, Cebpa-rs1
Feature Type protein coding gene
Genetic Map
Chromosome 17
49.65 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr17:78919006-78937070 bp, - strand
From Ensembl annotation of GRCm38

  18065 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4210  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Cebpz

Human
homologs
Human Homolog CEBPZ, CCAAT/enhancer binding protein (C/EBP), zeta
NCBI Gene ID 10153
neXtProt AC  NX_Q03701
Human Synonyms  CBF, CBF2, HSP-CBF, NOC1
Human Chr (Location)  2p22.2; chr2:37201629-37231597 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(3) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cebpz interacts with 205 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process positive regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, ...
Component nucleus
Function poly(A) RNA binding, RNA polymerase II core promoter proximal region sequence-specific DNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (301)    Tissues (91)    Images (28)
Theiler Stages: 15, 17, 19, 23, 28
Assay TypeResults
RNA in situ 209
RT-PCR 92
cDNA source data(16)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(20) cDNA(17) Primer pair(2) Other(1)
Microarray probesets(6)
Other database
links
Ensembl Gene ModelENSMUSG00000024081 (Evidence)
Entrez Gene12607 (Evidence)
DFCITC1574496, TC1607847, TC1639409, TC1657855
DoTSDT.101381502, DT.40187504, DT.535768, DT.97342966
NIA Mouse Gene IndexU038072
Consensus CDS ProjectCCDS28981.1
International Mouse Knockout Project StatusCebpz
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024081 Ensembl Gene Model | MGI Sequence Detail 18065 C57BL/6J ±  kb
transcript ENSMUST00000024885 Ensembl | MGI Sequence Detail 4074 Not Applicable 
polypeptide ENSMUSP00000024885 Ensembl | MGI Sequence Detail 1052 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(5) UniProt(3)
Polymorphisms RFLP(1) : SNPs within 2kb(210 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016024 Armadillo-type fold
InterPro IPR005612 CCAAT-binding factor
Protein Ontology PR:000005312 CCAAT/enhancer-binding protein zeta
References (Earliest) J:32095 Hoeppner MA, et al., Cloning and characterization of mouse CCAAT binding factor. Nucleic Acids Res. 1996 Mar 15;24(6):1091-8
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGD-MRK-38431, MGI:2146936

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory