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Krt36 Gene Detail
Summary
  • Symbol
    Krt36
  • Name
    keratin 36
  • Synonyms
    HRa-1, keratin 5, Krt1-22, Krt1-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:109364
    NCBI Gene: 16673
  • Gene Overview
    MyGene.info: KRT36
Location & Maps
more
  • Sequence Map
    Chr11:100102007-100105626 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3620 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 63.41 cM, cytoband D
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    KRT36, keratin 36
  • Vertebrate Orthologs
    7
  • Human Ortholog
    KRT36, keratin 36
    Orthology source: HomoloGene
  • Synonyms
    HA6, hHa6, KRTHA6
  • Links
    NCBI Gene ID: 8689
    neXtProt AC: NX_O76013

  • Chr Location
    17q21.2; chr17:41486136-41494015 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    3
  • Targeted
    3
  • Genomic Mutations
    1 involving Krt36
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002549 VEGA Gene Model | MGI Sequence Detail 3620 C57BL/6J ±  kb
transcript OTTMUST00000004977 VEGA | MGI Sequence Detail 1671 Not Applicable  
polypeptide OTTMUSP00000006696 VEGA | MGI Sequence Detail 473 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    44 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000009475 keratin, type I cuticular Ha6
  • InterPro Domains
    IPR001664 Intermediate filament protein
    IPR018039 Intermediate filament protein, conserved site
    IPR002957 Keratin, type I
Molecular
Reagents
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  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-38409
References
more
  • Summaries
    All 28
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:2252 Tobiasch E, et al., Structural features and sites of expression of a new murine 65 kD and 48 kD hair-related keratin pair, associated with a special type of parakeratotic epithelial differentiation. Differentiation. 1992 Aug;50(3):163-78
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory