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Lad1
Gene Detail
Symbol

Name
ID
Lad1
ladinin
MGI:109343
Feature Type
protein coding gene
Genetic Map
Chromosome 1
59.30 cM, cytoband E4
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:135818598-135833342 bp, + strand
From VEGA annotation of GRCm38

  14745 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4059  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog

Protein SuperFamily: ladinin 1
Gene Tree: Lad1

Human
homologs
Human Homolog LAD1, ladinin 1
NCBI Gene ID 3898
neXtProt AC  NX_O00515
Human Synonyms  LadA
Human Chr (Location)  1q25.1-q32.3; chr1:201380838-201399541 (-)  GRCh38
Interactions
Lad1 interacts with 145 markers (Mir17, Mir20b, Mir24-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Component basement membrane, extracellular region, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (101)    Tissues (16)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 101
cDNA source data(73)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(75) Genomic(2) cDNA(73)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000049829 (Evidence)
Ensembl Gene ModelENSMUSG00000041782 (Evidence)
Entrez Gene16763 (Evidence)
UniGene36726
DFCITC1578649
DoTSDT.94197891, DT.91334827, DT.101248606
NIA Mouse Gene IndexU000846
Consensus CDS ProjectCCDS35723.1
International Mouse Knockout Project StatusLad1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049829 VEGA Gene Model | MGI Sequence Detail 14745 C57BL/6J ±  kb
transcript OTTMUST00000126897 VEGA | MGI Sequence Detail 2993 Not Applicable 
polypeptide OTTMUSP00000068587 VEGA | MGI Sequence Detail 528 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(134 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017404 Ladinin 1
Protein Ontology PR:000009648 ladinin-1
References
(Earliest) J:38413 Motoki K, et al., Cloning and chromosomal mapping of mouse ladinin, a novel basement membrane zone component. Genomics. 1997 Feb 1;39(3):323-30
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(23)
Other
accession IDs
MGD-MRK-38388

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory