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Bnip1 Gene Detail
Summary
  • Symbol
    Bnip1
  • Name
    BCL2/adenovirus E1B interacting protein 1
  • Synonyms
    2010005M06Rik, 5930429G21Rik, MGC:41600
  • Feature Type
    protein coding gene
  • IDs
    MGI:109328
    NCBI Gene: 224630
Location & Maps
more
  • Sequence Map
    Chr17:26781079-26792565 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11487 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 13.56 cM
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    BNIP1, BCL2 interacting protein 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    BNIP1, BCL2 interacting protein 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    NIP1, SEC20, TRG-8
  • Links
    NCBI Gene ID: 662
    neXtProt AC: NX_Q12981

  • Chr Location
    5q35.1; chr5:173144442-173164387 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 930
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;2 zebrafish
  • HCOP
    human homology predictions: BNIP1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    2 involving Bnip1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028131 VEGA Gene Model | MGI Sequence Detail 11487 C57BL/6J ±  kb
transcript OTTMUST00000069679 VEGA | MGI Sequence Detail 1085 Not Applicable  
polypeptide OTTMUSP00000035425 VEGA | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    186 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000004779 vesicle transport protein SEC20
  • InterPro Domains
    IPR005606 Sec20
Molecular
Reagents
less
  • All nucleic 58
    cDNA 58

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-38373, MGI:1923767, MGI:3026983
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:37511 Boyd JM, et al., Adenovirus E1B 19 kDa and Bcl-2 proteins interact with a common set of cellular proteins [see comments] [published erratum appears in Cell 1994 Dec 16;79(6):following 1120]. Cell. 1994 Oct 21;79(2):341-51
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory