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Olfr20 Gene Detail
Summary
  • Symbol
    Olfr20
  • Name
    olfactory receptor 20
  • Synonyms
    GA_x6K02T2P1NL-3514066-3515010, MOR135-11, MTPCR06, MTPCR55, Olfr21
  • Feature Type
    protein coding gene
  • IDs
    MGI:109315
    NCBI Gene: 258925
  • Gene Overview
    MyGene.info: OR1E1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:73350859-73354699 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 45.30 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109315
protein coding gene Chr11:73350783-73355951 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018662
protein coding gene Chr11:74042518-74047397 (+)
A/J MGP_AJ_G0018630
protein coding gene Chr11:71262454-71266456 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0018602
protein coding gene Chr11:71563665-71567675 (+)
C3H/HeJ MGP_C3HHeJ_G0018415
protein coding gene Chr11:73394262-73398270 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019053
protein coding gene Chr11:76286926-76303266 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016696
protein coding gene Chr11:68068222-68072272 (+)
CAST/EiJ MGP_CASTEiJ_G0017970
protein coding gene Chr11:73776718-73780501 (+)
CBA/J MGP_CBAJ_G0018387
protein coding gene Chr11:79655135-79661840 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0018510
protein coding gene Chr11:80168253-80172733 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0017743
protein coding gene Chr11:71532927-71537114 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017533
protein coding gene Chr11:73343855-73344881 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR1E1, olfactory receptor family 1 subfamily E member 1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    OR1E1, olfactory receptor family 1 subfamily E member 1
    Orthology source: HGNC
  • Synonyms
    HGM071, OR13-66, OR17-2, OR17-32, OR1E5, OR1E6, OR1E8P, OR1E9P, OST547
  • Links
    NCBI Gene ID: 8387
    neXtProt AC: NX_P30953
    UniProt: P30953

  • Chr Location
    17p13.3; chr17:3397466-3398410 (-)  GRCh38.p7

  • Human Ortholog
    OR1E2, olfactory receptor family 1 subfamily E member 2
    Orthology source: HomoloGene
  • Synonyms
    OR17-135, OR17-136, OR17-93, OR1E4, OR1E7, OST529
  • Links
    NCBI Gene ID: 8388
    neXtProt AC: NX_P47887
    UniProt: P47887

  • Chr Location
    17p13.2; chr17:3432870-3433841 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258925 NCBI Gene Model | MGI Sequence Detail 3841 C57BL/6J ±  kb
transcript NM_146923 RefSeq | MGI Sequence Detail 1062 C57BL/6  
polypeptide NP_667134 RefSeq | MGI Sequence Detail 314 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-38359, MGD-MRK-38360, MGI:109314
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory