Dsc1
Gene Detail

Symbol

Name
ID

Dsc1
desmocollin 1
MGI:109173

Synonyms

Dsc1a, Dsc1b

Feature Type

protein coding gene

Genetic Map

Chromosome 18
11.17 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr18:20084703-20114773 bp, - strand From Ensembl annotation of GRCm38   30071 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:22761  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Dsc1

Human
homologs

Human Homolog		DSC1, desmocollin 1
NCBI Gene ID		1823
neXtProt AC		NX_Q08554
Human Synonyms		CDHF1, DG2/DG3
Human Chr (Location)		18q12.1; chr18:31129236-31162856 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 

Mutants with targeted disruptions of this gene have fragile epidermis, flaky skin, and defects in the epidermal barrier, leading to chronic dermatitis and display abnormal epidermal differentiation as indicated by hyperproliferation and overxpression of keratin 6 and 16.

 
Phenotype Images(5)

Interactions

Dsc1 interacts with 218 markers (Mir9-1, Mir9-2, Mir9-3, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (14 annotations)

Process	cell adhesion, homophilic cell adhesion via plasma membrane adhesion molecules
Component	cell junction, desmosome, ...
Function	calcium ion binding, protein binding

External Resources: FuncBase

Expression

Literature Summary: (11 records)

Data Summary: Results (6)    Tissues (3)    Tissue x Stage Matrix (view)

Assay Type	Results
Immunohistochemistry	6

cDNA source data(15)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(16) cDNA(16)
Microarray probesets(4)

Other database
links

Ensembl Gene Model	ENSMUSG00000044322 (Evidence)
Entrez Gene	13505 (Evidence)
UniGene	33740
DFCI	TC1589403
DoTS	DT.91333706, DT.40183936
NIA Mouse Gene Index	U038242
Consensus CDS Project	CCDS29078.1
International Mouse Knockout Project Status	Dsc1

Sequences

Length	Strain/Species
genomic	ENSMUSG00000044322	Ensembl Gene Model | MGI Sequence Detail	30071	C57BL/6J
transcript	ENSMUST00000038710	Ensembl | MGI Sequence Detail	3775	Not Applicable
polypeptide	ENSMUSP00000042303	Ensembl | MGI Sequence Detail	832	Not Applicable

All sequences(21) RefSeq(4) UniProt(4)

Polymorphisms

SNPs within 2kb(25 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR002126	Cadherin
InterPro	IPR020894	Cadherin conserved site
InterPro	IPR000233	Cadherin, cytoplasmic domain
InterPro	IPR015919	Cadherin-like
InterPro	IPR014868	Cadherin prodomain
InterPro	IPR027397	Catenin binding domain
InterPro	IPR009122	Desmosomal cadherin
Protein Ontology	PR:000006692	desmocollin-1

References

(Earliest) J:35511 King IA, et al., Expression of the skin-type desmosomal cadherin DSC1 is closely linked to the keratinization of epithelial tissues during mouse development. J Invest Dermatol. 1996 Oct;107(4):531-8
(Latest) J:191121 Ferone G, et al., p63 control of desmosome gene expression and adhesion is compromised in AEC syndrome. Hum Mol Genet. 2013 Feb 1;22(3):531-43
All references(39)

Other
accession IDs

MGD-MRK-38217