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Slc20a1
Gene Detail
Symbol

Name
ID
Slc20a1
solute carrier family 20, member 1
MGI:108392
Synonyms
Glvr1, Glvr-1, PiT-1
Feature Type
protein coding gene
Genetic Map
Chromosome 2
62.79 cM
Detailed Genetic Map ± 1 cM


Mapping data(8)
Sequence Map
Chr2:129198764-129211616 bp, + strand
From VEGA annotation of GRCm38

  12853 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38049  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC20A1
Gene Tree: Slc20a1

Human
homologs
SLC20A1, solute carrier family 20 (phosphate transporter), member 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 6574
neXtProt AC: NX_Q8WUM9

Human Synonyms: Glvr-1, GLVR1, PiT-1, PIT1

Human Chr (Location): 2q13; chr2:112645857-112663825 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(12) : Gene trapped(6) Targeted(6)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele exhibit mid-gestation lethality associated with abnormal vitelline vasculature, growth retardation, and anemia.
 
Interactions
Slc20a1 interacts with 224 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Expression
Literature Summary: (6 records)
Data Summary: Results (254)    Tissues (132)    Images (35)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 248
RT-PCR 6
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc20a1    NEW 
Molecular
reagents
All nucleic(23) Genomic(2) cDNA(18) Primer pair(3)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000015425 (Evidence)
Ensembl Gene Model ENSMUSG00000027397 (Evidence)
Entrez Gene 20515 (Evidence)
DFCI TC1572412, TC1591953, TC1588403
DoTS DT.103559533, DT.495908, DT.97340672, DT.91338932
NIA Mouse Gene Index U002456
Consensus CDS Project CCDS16722.1
International Mouse Phenotyping Consortium Status Slc20a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015425 VEGA Gene Model | MGI Sequence Detail 12853 C57BL/6J ±  kb
transcript OTTMUST00000036621 VEGA | MGI Sequence Detail 3316 Not Applicable 
polypeptide OTTMUSP00000016433 VEGA | MGI Sequence Detail 681 Not Applicable 

For the selected sequences
All sequences(62) RefSeq(6) UniProt(3)
Polymorphisms
RFLP(2) : SNPs within 2kb(124 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001204 Phosphate transporter
Protein Ontology PR:000014979 sodium-dependent phosphate transporter 1
References
(Earliest) J:11031 Kaelbling M, et al., Localization of the human gene allowing infection by gibbon ape leukemia virus to human chromosome region 2q11-q14 and to the homologous region on mouse chromosome 2. J Virol. 1991 Apr;65(4):1743-7
(Latest) J:211926 Ohata Y, et al., Elevated fibroblast growth factor 23 exerts its effects on placenta and regulates vitamin D metabolism in pregnancy of Hyp mice. J Bone Miner Res. 2014 Jul;29(7):1627-38
All references(51)
Other
accession IDs
MGD-MRK-10163, MGD-MRK-10164, MGD-MRK-37434, MGI:2139020

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory