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Zfp78 Gene Detail
Summary
  • Symbol
    Zfp78
  • Name
    zinc finger protein 78
  • Synonyms
    KRAB12, Zfp77
  • Feature Type
    protein coding gene
  • IDs
    MGI:107783
    NCBI Gene: 330463
  • Gene Overview
    MyGene.info: ZNF471
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:6363280-6382605 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 3.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107783
protein coding gene Chr7:6362647-6382605 (.)
129S1/SvImJ MGP_129S1SvImJ_G0031602
protein coding gene Chr7:3439488-3455396 (+)
A/J MGP_AJ_G0031575
protein coding gene Chr7:3356537-3364250 (+)
AKR/J MGP_AKRJ_G0031505
protein coding gene Chr7:3581036-3590456 (+)
BALB/cJ MGP_BALBcJ_G0031583
protein coding gene Chr7:3465656-3473345 (+)
C3H/HeJ MGP_C3HHeJ_G0031304
protein coding gene Chr7:3437314-3445983 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032046
protein coding gene Chr7:3645476-3661526 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029160
protein coding gene Chr7:3053927-3062059 (+)
CAST/EiJ MGP_CASTEiJ_G0030667
protein coding gene Chr7:3331356-3339792 (+)
CBA/J MGP_CBAJ_G0031261
protein coding gene Chr7:3763934-3774549 (+)
DBA/2J MGP_DBA2J_G0031420
protein coding gene Chr7:3380684-3388797 (+)
FVB/NJ MGP_FVBNJ_G0031374
protein coding gene Chr7:3375657-3383793 (+)
LP/J MGP_LPJ_G0031505
protein coding gene Chr7:3561365-3569021 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031412
protein coding gene Chr7:3753272-3761379 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032075
protein coding gene Chr7:3377355-3393216 (+)
PWK/PhJ MGP_PWKPhJ_G0030395
protein coding gene Chr7:3546302-3554943 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030221
protein coding gene Chr7:2969656-2978739 (+)
WSB/EiJ MGP_WSBEiJ_G0030762
protein coding gene Chr7:3525570-3534359 (+)



Homology
more
  • Human Ortholog
    ZNF471, zinc finger protein 471
  • Vertebrate Orthologs
    4
  • Human Ortholog
    ZNF471, zinc finger protein 471
    Orthology source: HomoloGene
  • Synonyms
    ERP1, Z1971
  • Links
    NCBI Gene ID: 57573
    neXtProt AC: NX_Q9BX82
    UniProt: Q9BX82

  • Chr Location
    19q13.43; chr19:56507843-56530214 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055150 Ensembl Gene Model | MGI Sequence Detail 19326 C57BL/6J ±  kb
transcript ENSMUST00000108559 Ensembl | MGI Sequence Detail 1539 Not Applicable  
polypeptide ENSMUSP00000104199 Ensembl | MGI Sequence Detail 512 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-36360
References
more
  • Summaries
    All 23
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:29678 Bellefroid EJ, et al., Emergence of the ZNF91 Kruppel-associated box-containing zinc finger gene family in the last common ancestor of anthropoidea. Proc Natl Acad Sci U S A. 1995 Nov 7;92(23):10757-61
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory