About   Help   FAQ
Zfp78
Gene Detail
Symbol

Name
ID
Zfp78
zinc finger protein 78
MGI:107783
Synonyms
KRAB12, Zfp77
Feature Type
protein coding gene
Genetic Map
Chromosome 7
3.69 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:6371364-6379491 bp, + strand
From Ensembl annotation of GRCm38

  8128 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128524  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque

HCOP human homology predictions: ZNF471
Protein SuperFamily: zinc finger protein ZFP-36
Gene Tree: Zfp78

Human
homologs
ZNF471, zinc finger protein 471
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 57573
neXtProt AC: NX_Q9BX82

Human Synonyms: ERP1, Z1971

Human Chr (Location): 19q13.43; chr19:56507843-56530212 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Gene trapped(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Zfp78 interacts with 32 markers (Mir22, Mir30a, Mir30d, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component nucleus
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000055150 (Evidence)
Entrez Gene 330463 (Evidence)
UniGene 136456
DFCI TC1586178, TC1592565
DoTS DT.103584748, DT.101282827, DT.91582754, DT.94282409
NIA Mouse Gene Index U042781
Consensus CDS Project CCDS20774.1, CCDS20775.1
International Mouse Phenotyping Consortium Status Zfp78
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055150 Ensembl Gene Model | MGI Sequence Detail 8128 C57BL/6J ±  kb
transcript ENSMUST00000108559 Ensembl | MGI Sequence Detail 1539 Not Applicable 
polypeptide ENSMUSP00000104199 Ensembl | MGI Sequence Detail 512 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(8) UniProt(5)
Polymorphisms
RFLP(1) : SNPs within 2kb(125 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001909 Krueppel-associated box
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017916 zinc finger protein 471
References
(Earliest) J:29678 Bellefroid EJ, et al., Emergence of the ZNF91 Kruppel-associated box-containing zinc finger gene family in the last common ancestor of anthropoidea. Proc Natl Acad Sci U S A. 1995 Nov 7;92(23):10757-61
(Latest) J:156017 Yokoyama S, et al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Dev Cell. 2009 Dec;17(6):836-48
All references(24)
Other
accession IDs
MGD-MRK-36360

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/20/2015
MGI 5.22
The Jackson Laboratory