Lgals4
Gene Detail

Symbol Name ID

Lgals4 lectin, galactose binding, soluble 4 MGI:107536

Synonyms

galectin-4

Feature Type

protein coding gene

Genetic Map

Chromosome 7

16.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr7:28833975-28841703 bp, + strand From VEGA annotation of GRCm38   7729 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:21239  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: galectin
Gene Tree: Lgals4

Human homologs

Human Homolog		LGALS4, lectin, galactoside-binding, soluble, 4
NCBI Gene ID		3960
neXtProt AC		NX_P56470
Human Synonyms		GAL4, L36LBP
Human Chr (Location)		19q13.2; chr19:39292311-39303740 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (2 annotations)

Function

carbohydrate binding, protein binding

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (44)    Tissues (18)    Images (15)
Theiler Stages: 2, 3, 23, 28

Assay Type	Results
Immunohistochemistry	1
RNA in situ	22
RT-PCR	21

cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(18) Genomic(1) cDNA(15) Primer pair(2)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000022686 (Evidence)
Ensembl Gene Model	ENSMUSG00000053964 (Evidence)
Entrez Gene	16855 (Evidence)
DFCI	TC1575048
DoTS	DT.102534270, DT.94339745
PDB	2DYC, 3I8T
Consensus CDS Project	CCDS21058.1
International Mouse Knockout Project Status	Lgals4

Sequences

Length	Strain/Species
genomic	OTTMUSG00000022686	VEGA Gene Model | MGI Sequence Detail	7729	C57BL/6J
transcript	OTTMUST00000054398	VEGA | MGI Sequence Detail	1258	Not Applicable
polypeptide	OTTMUSP00000025965	VEGA | MGI Sequence Detail	326	Not Applicable

All sequences(40) RefSeq(2) UniProt(5)

Polymorphisms

RFLP(1) : SNPs(43 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR008985	Concanavalin A-like lectin/glucanases superfamily
InterPro	IPR013320	Concanavalin A-like lectin/glucanase, subgroup
InterPro	IPR015533	Galectin-4/6
InterPro	IPR001079	Galectin, carbohydrate recognition domain
Protein Ontology	PR:000009773	galectin-4

References

(Earliest) J:33381 Jonassen T, et al., Isolation and sequencing of the rat Coq7 gene and the mapping of mouse Coq7 to chromosome 7. (Correction appears in Arch Biochem Biophys 1996; 335(1):227). Arch Biochem Biophys. 1996 Jun 15;330(2):285-9
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)

Other accession IDs

MGD-MRK-36106