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Cdh10 Gene Detail
Summary
  • Symbol
    Cdh10
  • Name
    cadherin 10
  • Synonyms
    A830016G23Rik, C030003B10Rik, C030011H18Rik, T2-cadherin
  • Feature Type
    protein coding gene
  • IDs
    MGI:107436
    NCBI Gene: 320873
  • Gene Overview
    MyGene.info: CDH10
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:18818947-19014236 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 8.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1943 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107436
protein coding gene Chr15:18818798-19014236 (.)
129S1/SvImJ MGP_129S1SvImJ_G0021743
protein coding gene Chr15:16419438-16637701 (+)
A/J MGP_AJ_G0021703
protein coding gene Chr15:15855310-16053045 (+)
AKR/J MGP_AKRJ_G0021681
protein coding gene Chr15:16242803-16432514 (+)
BALB/cJ MGP_BALBcJ_G0021710
protein coding gene Chr15:15849142-16045374 (+)
C3H/HeJ MGP_C3HHeJ_G0021486
protein coding gene Chr15:16257145-16454818 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022149
protein coding gene Chr15:17105088-17316098 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019690
protein coding gene Chr15:14878835-15070022 (+)
CAST/EiJ MGP_CASTEiJ_G0021002
protein coding gene Chr15:16592686-16798577 (+)
CBA/J MGP_CBAJ_G0021455
protein coding gene Chr15:17742226-17943473 (+)
DBA/2J MGP_DBA2J_G0021579
protein coding gene Chr15:15683519-15879282 (+)
FVB/NJ MGP_FVBNJ_G0021557
protein coding gene Chr15:15385049-15581002 (+)
LP/J MGP_LPJ_G0021647
protein coding gene Chr15:16348514-16567071 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021582
protein coding gene Chr15:19181022-19431743 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022172
protein coding gene Chr15:16368477-16573441 (+)
PWK/PhJ MGP_PWKPhJ_G0020745
protein coding gene Chr15:15938985-16138286 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020583
protein coding gene Chr15:16235144-16433718 (+)
WSB/EiJ MGP_WSBEiJ_G0021058
protein coding gene Chr15:16291353-16500009 (+)



Homology
more
  • Human Ortholog
    CDH10, cadherin 10
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CDH10, cadherin 10
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 1008
    neXtProt AC: NX_Q9Y6N8
    UniProt: Q9Y6N8

  • Chr Location
    5p14.2-p14.1; chr5:24487100-24644978 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022321 Ensembl Gene Model | MGI Sequence Detail 195290 C57BL/6J ±  kb
transcript ENSMUST00000166873 Ensembl | MGI Sequence Detail 3176 Not Applicable  
polypeptide ENSMUSP00000128782 Ensembl | MGI Sequence Detail 788 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 18
    Primer pair 3
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-35907, MGI:1924570, MGI:1925944, MGI:2444931
References
more
  • Summaries
    All 50
    Developmental Gene Expression 17
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:245526 Bibollet-Bahena O, et al., A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. PLoS One. 2017;12(5):e0177977

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory