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Slc50a1 Gene Detail
Summary
  • Symbol
    Slc50a1
  • Name
    solute carrier family 50 (sugar transporter), member 1
  • Synonyms
    Rag1ap1, Rga
  • Feature Type
    protein coding gene
  • IDs
    MGI:107417
    NCBI Gene: 19729
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:89175553-89177877 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 39.04 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    126 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107417
 protein coding gene Chr3:89175553-89177878 (-)
129S1/SvImJ ENSMUSG00200038991
 protein coding gene Chr3:86030539-86032863 (-)
A/J ENSMUSG00195053073
 protein coding gene Chr3:86045512-86047836 (-)
AKR/J ENSMUSG00220045792
 protein coding gene Chr3:86000093-86002417 (-)
BALB/cJ ENSMUSG00180045711
 protein coding gene Chr3:86127566-86129890 (-)
C3H/HeJ ENSMUSG00175040053
 protein coding gene Chr3:85978148-85980472 (-)
C57BL/6NJ ENSMUSG00215046445
 protein coding gene Chr3:86418290-86420614 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025199
 protein coding gene Chr3:81993652-81996152 (-)
CAST/EiJ ENSTCUG00005042586
 protein coding gene Chr3:85493372-85495696 (-)
CBA/J ENSMUSG00210044756
 protein coding gene Chr3:86115798-86118122 (-)
DBA/2J ENSMUSG00185049750
 protein coding gene Chr3:86216062-86218386 (-)
FVB/NJ ENSMUSG00205042154
 protein coding gene Chr3:85039759-85042083 (-)
JF1/MsJ ENSUMUG00000022650
 protein coding gene Chr3:85824350-85826666 (-)
LP/J ENSMUSG00230029754
 protein coding gene Chr3:88251853-88254177 (-)
NOD/ShiLtJ ENSMUSG00190030930
 protein coding gene Chr3:86500784-86503108 (-)
NZO/HlLtJ ENSMUSG00225007493
 protein coding gene Chr3:91007115-91009439 (-)
PWK/PhJ ENSLUMG00010051472
 protein coding gene Chr3:85866054-85868370 (-)
SPRET/EiJ ENSMSPG00010048641
 protein coding gene Chr3:86727241-86729564 (-)
WSB/EiJ ENSIUOG00005048923
 protein coding gene Chr3:86522279-86524603 (-)



Homology
more
  • Human Ortholog
    SLC50A1, solute carrier family 50 member 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC50A1, solute carrier family 50 member 1
  • Synonyms
    HsSWEET1, RAG1AP1, SCP, slv, SWEET1
  • Links
    NCBI Gene ID: 55974
    UniProt: Q9BRV3

  • Chr Location
    1q22; chr1:155135344-155138857 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    646
  • Tissues
    42
  • cDNA Data
    42
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000027953 Ensembl Gene Model | MGI Sequence Detail 2325 C57BL/6J ±  kb
    transcript ENSMUST00000029565 Ensembl | MGI Sequence Detail 1022 Not Applicable  
    polypeptide ENSMUSP00000029565 Ensembl | MGI Sequence Detail 221 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 44
      cDNA 44

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-35886
    References
    more
    • Summaries
      All 50
      Developmental Gene Expression 2
      Diseases 1
      Gene Ontology 9
      Phenotypes 15
    • Earliest
      J:33663 Tagoh H, et al., Molecular cloning and characterization of a novel stromal cell-derived cDNA encoding a protein that facilitates gene activation of recombination activating gene (RAG)-1 in human lymphoid progenitors. Biochem Biophys Res Commun. 1996 Apr 25;221(3):744-9
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/01/2026
    MGI 6.24     		The Jackson Laboratory