Slc50a1
Gene Detail

Symbol Name ID

Slc50a1 solute carrier family 50 (sugar transporter), member 1 MGI:107417

Synonyms

Rag1ap1, Rga

Feature Type

protein coding gene

Genetic Map

Chromosome 3

39.04 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr3:89268246-89270570 bp, - strand From VEGA annotation of GRCm38   2325 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:40647  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Slc50a1

Human homologs

Human Homolog		SLC50A1, solute carrier family 50 (sugar transporter), member 1
NCBI Gene ID		55974
neXtProt AC		NX_Q9BRV3
Human Synonyms		HsSWEET1, RAG1AP1, SCP, slv, SWEET1
Human Chr (Location)		1q22; chr1:155108288-155111334 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Targeted(2) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (13 annotations)

Process	carbohydrate transport, DNA recombination, ...
Component	endomembrane system, Golgi apparatus, ...
Function	glucoside transmembrane transporter activity

External Resources: FuncBase

Expression

cDNA source data(41)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(43) cDNA(43)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000021858 (Evidence)
Ensembl Gene Model	ENSMUSG00000027953 (Evidence)
Entrez Gene	19729 (Evidence)
UniGene	17958
DFCI	TC1579392, TC1680470
DoTS	DT.101383630, DT.101383631, DT.490353
NIA Mouse Gene Index	U024273
Consensus CDS Project	CCDS17500.1
International Mouse Knockout Project Status	Slc50a1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000021858	VEGA Gene Model | MGI Sequence Detail	2325	C57BL/6J
transcript	OTTMUST00000051870	VEGA | MGI Sequence Detail	1022	Not Applicable
polypeptide	OTTMUSP00000024485	VEGA | MGI Sequence Detail	221	Not Applicable

All sequences(50) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(6 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR018180	RAG1-activating protein 1
InterPro	IPR004316	SWEET sugar transporter
Protein Ontology	PR:000013689	RAG1-activating protein 1

References

(Earliest) J:33663 Tagoh H, et al., Molecular cloning and characterization of a novel stromal cell-derived cDNA encoding a protein that facilitates gene activation of recombination activating gene (RAG)-1 in human lymphoid progenitors. Biochem Biophys Res Commun. 1996 Apr 25;221(3):744-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)

Other accession IDs

MGD-MRK-35886