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Slc50a1 Gene Detail
Summary
  • Symbol
    Slc50a1
  • Name
    solute carrier family 50 (sugar transporter), member 1
  • Synonyms
    Rag1ap1, Rga
  • Feature Type
    protein coding gene
  • IDs
    MGI:107417
    NCBI Gene: 19729
Location & Maps
more
  • Sequence Map
    Chr3:89268246-89270570 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2325 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    SLC50A1, solute carrier family 50 member 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC50A1, solute carrier family 50 member 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    HsSWEET1, RAG1AP1, SCP, slv, SWEET1
  • Links
    NCBI Gene ID: 55974
    neXtProt AC: NX_Q9BRV3

  • Chr Location
    1q22; chr1:155135344-155138858 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Slc50a1
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021858 VEGA Gene Model | MGI Sequence Detail 2325 C57BL/6J ±  kb
transcript OTTMUST00000051870 VEGA | MGI Sequence Detail 1022 Not Applicable  
polypeptide OTTMUSP00000024485 VEGA | MGI Sequence Detail 221 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    10 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000013689 sugar transporter SWEET1
  • InterPro Domains
    IPR004316 SWEET sugar transporter
Molecular
Reagents
less
  • All nucleic 43
    cDNA 43

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-35886
References
more
  • Summaries
    All 34
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:33663 Tagoh H, et al., Molecular cloning and characterization of a novel stromal cell-derived cDNA encoding a protein that facilitates gene activation of recombination activating gene (RAG)-1 in human lymphoid progenitors. Biochem Biophys Res Commun. 1996 Apr 25;221(3):744-9
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
04/19/2016
MGI 6.03
The Jackson Laboratory