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Arnt2 Gene Detail
Summary
  • Symbol
    Arnt2
  • Name
    aryl hydrocarbon receptor nuclear translocator 2
  • Synonyms
    bHLHe1, mKIAA0307
  • Feature Type
    protein coding gene
  • IDs
    MGI:107188
    NCBI Gene: 11864
  • Gene Overview
    MyGene.info: ARNT2
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:84246278-84410176 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 48.35 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1568 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107188
 protein coding gene Chr7:84246274-84411741 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032458
 protein coding gene Chr7:86426748-86589690 (-)
A/J MGP_AJ_G0032435
 protein coding gene Chr7:84342413-84505318 (-)
AKR/J MGP_AKRJ_G0032372
 protein coding gene Chr7:86294719-86459839 (-)
BALB/cJ MGP_BALBcJ_G0032448
 protein coding gene Chr7:84009736-84171192 (-)
C3H/HeJ MGP_C3HHeJ_G0032162
 protein coding gene Chr7:86841869-87008011 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032939
 protein coding gene Chr7:89766110-89932287 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029947
 protein coding gene Chr7:86689864-86846716 (-)
CAST/EiJ MGP_CASTEiJ_G0031488
 protein coding gene Chr7:77799724-77990212 (-)
CBA/J MGP_CBAJ_G0032127
 protein coding gene Chr7:92784240-92951320 (-)
DBA/2J MGP_DBA2J_G0032282
 protein coding gene Chr7:82845384-83011697 (-)
FVB/NJ MGP_FVBNJ_G0032236
 protein coding gene Chr7:82797259-82958933 (-)
LP/J MGP_LPJ_G0032363
 protein coding gene Chr7:87684209-87849279 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032273
 protein coding gene Chr7:92803928-92987267 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032959
 protein coding gene Chr7:85677256-85842518 (-)
PWK/PhJ MGP_PWKPhJ_G0031209
 protein coding gene Chr7:76062233-76257293 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031051
 protein coding gene Chr7:72622974-72830467 (-)
WSB/EiJ MGP_WSBEiJ_G0031605
 protein coding gene Chr7:86047226-86213685 (-)



Homology
more
  • Human Ortholog
    ARNT2, aryl hydrocarbon receptor nuclear translocator 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARNT2, aryl hydrocarbon receptor nuclear translocator 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bHLHe1, WEDAS
  • Links
    NCBI Gene ID: 9915
    neXtProt AC: NX_Q9HBZ2
    UniProt: Q9HBZ2

  • Chr Location
    15q25.1; chr15:80404350-80597937 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotypes from 4 alleles in 4 genetic backgrounds
    1 phenotype from multigenic genotypes
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for targeted mutations that inactivate this gene die shortly after birth, displaying impaired development of secretory neurons in the hypothalamus.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    38
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1113
  • Tissues
    305
  • cDNA Data
    13
  • Literature Summary
    20
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000015709 Ensembl Gene Model | MGI Sequence Detail 163899 C57BL/6J ±  kb
    transcript ENSMUST00000085077 Ensembl | MGI Sequence Detail 6151 Not Applicable  
    polypeptide ENSMUSP00000082154 Ensembl | MGI Sequence Detail 712 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 27
      Genomic 11
      cDNA 14
      Primer pair 2

      Microarray probesets 8
    Other
    Accession IDs
    less
    MGD-MRK-35649
    References
    more
    • Summaries
      All 71
      Developmental Gene Expression 20
      Gene Ontology 13
      Phenotypes 17
    • Earliest
      J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
    • Latest
      J:277910 Sharma N, et al., ARNT2 Tunes Activity-Dependent Gene Expression through NCoR2-Mediated Repression and NPAS4-Mediated Activation. Neuron. 2019 Apr 17;102(2):390-406.e9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/10/2020
    MGI 6.16     		The Jackson Laboratory