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Olfr16
Gene Detail
Symbol

Name
ID
Olfr16
olfactory receptor 16
MGI:106648
Synonyms
GA_x6K02T2R7CC-893157-892228, MOR23, MOR267-13
Feature Type
protein coding gene
Genetic Map
Chromosome 1
80.33 cM, cytoband H4-H5
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr1:172956768-172957817 bp, + strand
From VEGA annotation of GRCm38

  1050 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7460  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

HCOP human homology predictions: OR10J5
Protein SuperFamily: G protein-coupled olfactory receptor, class II
Gene Tree: Olfr16

Human
homologs
OR10J5, olfactory receptor, family 10, subfamily J, member 5
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 127385
neXtProt AC: NX_Q8NHC4

Human Synonyms: OR1-28

Human Chr (Location): 1q23.2; chr1:159535078-159536007 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Olfr16 interacts with 21 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (6 records)
Data Summary: Results (36)    Tissues (20)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 10
In situ reporter (knock in) 14
RT-PCR 12
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(29) Genomic(18) cDNA(7) Primer pair(3) Other(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000050161 (Evidence)
Ensembl Gene Model ENSMUSG00000037924 (Evidence)
Entrez Gene 18313 (Evidence)
UniGene 377103
DFCI TC1600194
DoTS DT.91316929
Consensus CDS Project CCDS15521.1
International Mouse Phenotyping Consortium Status Olfr16
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050161 VEGA Gene Model | MGI Sequence Detail 1050 C57BL/6J ±  kb
transcript OTTMUST00000127517 VEGA | MGI Sequence Detail 1050 Not Applicable 
polypeptide OTTMUSP00000068772 VEGA | MGI Sequence Detail 309 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(1)
Polymorphisms
PCR(1) : SNPs within 2kb(30 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR000725 Olfactory receptor
Protein Ontology PR:000011675 olfactory receptor 10J5
References
(Earliest) J:22205 Ressler KJ, et al., Information coding in the olfactory system: evidence for a stereotyped and highly organized epitope map in the olfactory bulb. Cell. 1994 Dec 30;79(7):1245-55
(Latest) J:221945 Bressel OC, et al., Linear Correlation Between the Number of Olfactory Sensory Neurons Expressing a Given Mouse Odorant Receptor Gene and the Total Volume of the Corresponding Glomeruli in the Olfactory Bulb. J Comp Neurol. 2015 Jun 23;
All references(37)
Other
accession IDs
MGD-MRK-35105

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory