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Olfr16
Gene Detail
 Symbol
Name
ID
Olfr16
olfactory receptor 16
MGI:106648
Synonyms GA_x6K02T2R7CC-893157-892228, MOR23, MOR267-13
Feature Type protein coding gene
Genetic Map
Chromosome 1
80.33 cM, cytoband H4-H5
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr1:172956768-172957817 bp, + strand
From NCBI annotation of GRCm38

  1050 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7460  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Protein SuperFamily: G protein-coupled olfactory receptor, class II
Gene Tree: Olfr16

Human
homologs
Human Homolog OR10J5, olfactory receptor, family 10, subfamily J, member 5
NCBI Gene ID 127385
neXtProt AC  NX_Q8NHC4
Human Synonyms  OR1-28
Human Chr (Location)  1q23.2; chr1:159535078-159536007 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Olfr16 interacts with 21 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process detection of chemical stimulus involved in sensory perception of smell, G-protein coupled receptor signaling pathway, ...
Component integral component of membrane, membrane, ...
Function G-protein coupled receptor activity, olfactory receptor activity, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (22)    Tissues (14)   
Theiler Stages: 14, 15, 16, 17, 18, 19, 20, 21, 24, 25, 28
Assay TypeResults
RNA in situ 10
RT-PCR 12
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(29) Genomic(18) cDNA(7) Primer pair(3) Other(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000037924 (Evidence)
Entrez Gene18313 (Evidence)
UniGene377103
DFCITC1600194
DoTSDT.91316929
Consensus CDS ProjectCCDS15521.1
International Mouse Knockout Project StatusOlfr16
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 18313 NCBI Gene Model | MGI Sequence Detail 1050 C57BL/6J ±  kb
transcript NM_008763 RefSeq | MGI Sequence Detail 1050 C57BL/6 
polypeptide NP_032789 RefSeq | MGI Sequence Detail 309 C57BL/6 

For the selected sequences
All sequences(13) RefSeq(2) UniProt(1)
Polymorphisms PCR(1) : SNPs within 2kb(30 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR000725 Olfactory receptor
Protein Ontology PR:000011675 olfactory receptor 10J5
References (Earliest) J:22205 Ressler KJ, et al., Information coding in the olfactory system: evidence for a stereotyped and highly organized epitope map in the olfactory bulb. Cell. 1994 Dec 30;79(7):1245-55
(Latest) J:201831 Khodosevich K, et al., Connective tissue growth factor regulates interneuron survival and information processing in the olfactory bulb. Neuron. 2013 Sep 18;79(6):1136-51
All references(37)
Other
accession IDs
MGD-MRK-35105

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory