About   Help   FAQ
Slc30a2
Gene Detail
Symbol

Name
ID
Slc30a2
solute carrier family 30 (zinc transporter), member 2
MGI:106637
Synonyms
Znt2
Feature Type
protein coding gene
Genetic Map
Chromosome 4
66.61 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr4:134343181-134354484 bp, + strand
From VEGA annotation of GRCm38

  11304 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40855  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC30A2
Protein SuperFamily: cation efflux protein
Gene Tree: Slc30a2

Human
homologs
SLC30A2, solute carrier family 30 (zinc transporter), member 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 7780
neXtProt AC: NX_Q9BRI3

Human Synonyms: PP12488, TNZD, ZnT-2, ZNT2

Human Chr (Location): 1p35.3; chr1:26038022-26046138 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SLC30A2

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(10) Targeted(1)
Genomic Mutations involving Slc30a2 (1)
Incidental mutations (data from APF )
Interactions
Slc30a2 interacts with 193 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (21)    Tissues (3)    Images (17)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 21
cDNA source data(26)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc30a2 ; ZFIN slc30a2    NEW 
Molecular
reagents
All nucleic(30) Genomic(1) cDNA(27) Primer pair(1) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000010829 (Evidence)
Ensembl Gene Model ENSMUSG00000028836 (Evidence)
Entrez Gene 230810 (Evidence)
UniGene 358876
DFCI TC1595307, TC1604033, TC1604066
DoTS DT.101190578, DT.55261707, DT.97392132
NIA Mouse Gene Index U004934
Consensus CDS Project CCDS38915.1
International Mouse Phenotyping Consortium Status Slc30a2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010829 VEGA Gene Model | MGI Sequence Detail 11304 C57BL/6J ±  kb
transcript OTTMUST00000025324 VEGA | MGI Sequence Detail 3153 Not Applicable 
polypeptide OTTMUSP00000011613 VEGA | MGI Sequence Detail 371 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(5) UniProt(4)
Polymorphisms
RFLP(1) : SNPs within 2kb(171 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002524 Cation efflux protein
InterPro IPR027469 Cation efflux protein transmembrane domain
Protein Ontology PR:000015075 zinc transporter 2
References
(Earliest) J:32792 Palmiter RD, et al., ZnT-2, a mammalian protein that confers resistance to zinc by facilitating vesicular sequestration. EMBO J. 1996 Apr 15;15(8):1784-91
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGD-MRK-35094

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory