Nhsl1
Gene Detail

Symbol Name ID

Nhsl1 NHS-like 1 MGI:106390

Synonyms

5730409E15Rik, A630035H13Rik, D10Bwg0940e

Feature Type

protein coding gene

Genetic Map

Chromosome 10

7.65 cM, cytoband A2
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr10:18390322-18533892 bp, + strand From VEGA annotation of GRCm38   143571 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:27834  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Nhsl1

Human homologs

Human Homolog		NHSL1, NHS-like 1
NCBI Gene ID		57224
neXtProt AC		NX_Q5SYE7
Human Synonyms		C6orf63
Human Chr (Location)		6q23.3; chr6:138743180-138893668 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(30) : Targeted(1) Gene trapped(29)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(9)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(10) cDNA(9) Primer pair(1)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000034982 (Evidence)
Ensembl Gene Model	ENSMUSG00000039835 (Evidence)
Entrez Gene	215819 (Evidence)
DFCI	TC1578613, TC1590148, TC1590473, TC1598297, TC1637711
DoTS	DT.101177357, DT.101321726, DT.101322906, DT.101721234, DT.55192157, DT.91378427
NIA Mouse Gene Index	U011304
Consensus CDS Project	CCDS35853.1, CCDS48508.1
International Mouse Knockout Project Status	Nhsl1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000034982	VEGA Gene Model | MGI Sequence Detail	143571	C57BL/6J
transcript	OTTMUST00000088964	VEGA | MGI Sequence Detail	7321	Not Applicable
polypeptide	OTTMUSP00000048557	VEGA | MGI Sequence Detail	1587	Not Applicable

All sequences(59) RefSeq(4) UniProt(3)

Polymorphisms

SNPs(617 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR024845	Nance-Horan syndrome protein family
Protein Ontology	PR:000011205	NHS-like protein 1

References

(Earliest) J:44483 Brady KP, et al., Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Genome Res. 1997 Nov;7(11):1085-93
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)

Other accession IDs

MGD-MRK-34083, MGI:1917752, MGI:2444499, MGI:2674131