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Fam104a Gene Detail
Summary
  • Symbol
    Fam104a
  • Name
    family with sequence similarity 104, member A
  • Synonyms
    D11Wsu99e
  • Feature Type
    protein coding gene
  • IDs
    MGI:106351
    NCBI Gene: 28081
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:113661319-113684155 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 79.12 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    202 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_106351
protein coding gene Chr11:113661319-113684176 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0019320
protein coding gene Chr11:112428972-112451850 (-)
AKR/J MGP_AKRJ_G0018132
protein coding gene Chr11:44888850-44890734 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0019744
protein coding gene Chr11:121014067-121039222 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017367
protein coding gene Chr11:109504828-109528285 (-)
CAST/EiJ MGP_CASTEiJ_G0018656
protein coding gene Chr11:117359807-117385084 (-)
CBA/J MGP_CBAJ_G0019072
protein coding gene Chr11:125948075-125971101 (-)
DBA/2J MGP_DBA2J_G0019184
protein coding gene Chr11:111865606-111888481 (-)
FVB/NJ MGP_FVBNJ_G0019175
protein coding gene Chr11:111342811-111366883 (-)
LP/J MGP_LPJ_G0019254
protein coding gene Chr11:117925678-117952584 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019206
protein coding gene Chr11:125098139-125122608 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019781
protein coding gene Chr11:116388891-116413599 (-)
PWK/PhJ MGP_PWKPhJ_G0018421
protein coding gene Chr11:113076172-113099702 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018213
protein coding gene Chr11:116201011-116223040 (-)
WSB/EiJ MGP_WSBEiJ_G0018708
protein coding gene Chr11:116350540-116374446 (-)



Homology
more
  • Human Ortholog
    FAM104A, family with sequence similarity 104 member A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    FAM104A, family with sequence similarity 104 member A
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84923
    neXtProt AC: NX_Q969W3
    UniProt: Q969W3

  • Chr Location
    17q25.1; chr17:73207353-73232394 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041629 Ensembl Gene Model | MGI Sequence Detail 22837 C57BL/6J ±  kb
    transcript ENSMUST00000120194 Ensembl | MGI Sequence Detail 2619 Not Applicable  
    polypeptide ENSMUSP00000113652 Ensembl | MGI Sequence Detail 185 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • InterPro Domains
      IPR029222 Protein FAM104
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 16
      Primer pair 1

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGD-MRK-34043
    References
    more
    • Summaries
      All 28
      Developmental Gene Expression 1
      Phenotypes 8
    • Earliest
      J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    03/19/2019
    MGI 6.13
    The Jackson Laboratory