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Rcor1
Gene Detail
 Symbol
Name
ID
Rcor1
REST corepressor 1
MGI:106340
Synonyms 6720480E22Rik, D12Wsu95e, mKIAA0071, Rocr1
Feature Type protein coding gene
Genetic Map
Chromosome 12
60.93 cM
Detailed Genetic Map ± 1 cM


Mapping data(6)
Sequence Map
Chr12:111039351-111115901 bp, + strand
From VEGA annotation of GRCm38

  76551 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32246  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Rcor1

Human
homologs
Human Homolog RCOR1, REST corepressor 1
NCBI Gene ID 23186
neXtProt AC  NX_Q9UKL0
Human Synonyms  COREST, RCOR
Human Chr (Location)  14q32.31; chr14:102592659-102730576 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(24) : Gene trapped(21) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rcor1 interacts with 432 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process chromatin modification, erythrocyte differentiation, ...
Component nucleus, transcriptional repressor complex
Function chromatin binding, DNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (71)    Tissues (19)    Images (10)
Theiler Stages: 2, 3, 11, 21, 22, 23, 24
Assay TypeResults
RNA in situ 29
RT-PCR 42
cDNA source data(18)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(22) cDNA(19) Primer pair(3)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000029929 (Evidence)
Ensembl Gene ModelENSMUSG00000037896 (Evidence)
Entrez Gene217864 (Evidence)
DFCITC1577907, TC1612534
DoTSDT.492140
NIA Mouse Gene IndexU014421
Consensus CDS ProjectCCDS49179.1
International Mouse Knockout Project StatusRcor1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029929 VEGA Gene Model | MGI Sequence Detail 76551 C57BL/6J ±  kb
transcript OTTMUST00000074256 VEGA | MGI Sequence Detail 5684 Not Applicable 
polypeptide OTTMUSP00000062788 VEGA | MGI Sequence Detail 480 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(238 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000949 ELM2 domain
InterPro IPR009057 Homeodomain-like
InterPro IPR017884 SANT domain
InterPro IPR001005 SANT/Myb domain
Protein Ontology PR:000013841 REST corepressor 1
References (Earliest) J:37953 Lan Y, et al., The Jagged2 gene maps to chromosome 12 and is a candidate for the lgl and sm mutations. Mamm Genome. 1997;8(11):875-6
(Latest) J:196140 Xu J, et al., Corepressor-dependent silencing of fetal hemoglobin expression by BCL11A. Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6518-23
All references(49)
Other
accession IDs
MGD-MRK-34032, MGI:2144964, MGI:2441723

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory