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Gramd1a Gene Detail
Summary
  • Symbol
    Gramd1a
  • Name
    GRAM domain containing 1A
  • Synonyms
    1300003M23Rik, D7Bwg0611e
  • Feature Type
    protein coding gene
  • IDs
    MGI:105490
    NCBI Gene: 52857
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:31130127-31155896 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 19.30 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    321 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_105490
protein coding gene Chr7:31130127-31155936 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032063
protein coding gene Chr7:30194927-30220667 (-)
A/J MGP_AJ_G0032040
protein coding gene Chr7:29380008-29405750 (-)
AKR/J MGP_AKRJ_G0031973
protein coding gene Chr7:30118133-30143911 (-)
BALB/cJ MGP_BALBcJ_G0032047
protein coding gene Chr7:29555249-29580992 (-)
C3H/HeJ MGP_C3HHeJ_G0031764
protein coding gene Chr7:30581554-30607320 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032513
protein coding gene Chr7:31200715-31226551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029563
protein coding gene Chr7:30332703-30358563 (-)
CAST/EiJ MGP_CASTEiJ_G0031100
protein coding gene Chr7:23838387-23865341 (-)
CBA/J MGP_CBAJ_G0031732
protein coding gene Chr7:32659302-32685114 (-)
DBA/2J MGP_DBA2J_G0031884
protein coding gene Chr7:29094028-29119747 (-)
FVB/NJ MGP_FVBNJ_G0031840
protein coding gene Chr7:29212497-29238889 (-)
LP/J MGP_LPJ_G0031965
protein coding gene Chr7:30532570-30558993 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031877
protein coding gene Chr7:31884453-31916254 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032539
protein coding gene Chr7:29629235-29656145 (-)
PWK/PhJ MGP_PWKPhJ_G0030822
protein coding gene Chr7:24135627-24161381 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030659
protein coding gene Chr7:20621438-20647149 (-)
WSB/EiJ MGP_WSBEiJ_G0031210
protein coding gene Chr7:30037312-30064137 (-)



Homology
more
  • Human Ortholog
    GRAMD1A, GRAM domain containing 1A
  • Vertebrate Orthologs
    8
  • Human Ortholog
    GRAMD1A, GRAM domain containing 1A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KIAA1533
  • Links
    NCBI Gene ID: 57655
    neXtProt AC: NX_Q96CP6
    UniProt: Q96CP6

  • Chr Location
    19q13.11; chr19:34994784-35026471 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001248 Ensembl Gene Model | MGI Sequence Detail 25770 C57BL/6J ±  kb
transcript ENSMUST00000001280 Ensembl | MGI Sequence Detail 2713 Not Applicable  
polypeptide ENSMUSP00000001280 Ensembl | MGI Sequence Detail 722 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 113
    cDNA 112
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-33162, MGI:1918998, MGI:2141930, MGI:2142256
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:44483 Brady KP, et al., Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Genome Res. 1997 Nov;7(11):1085-93
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory