Rprl1 Gene Detail

Summary

• Symbol
  Rprl1
• Name
  ribonuclease P RNA-like 1
• Synonyms
  Rmrp2, RPRH2

• Feature Type
  RNase P RNA gene
  BioType Conflict
  
• IDs
  MGI:105105
  NCBI Gene: 19783
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:69303921-69304158 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 31.46 cM

Strain
Comparison

• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_105105	RNase P RNA gene	Chr6:69303828-69304158 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005544	lincRNA gene	Chr14:44758344-44758581 (-)
A/J	MGP_AJ_G0036786	ribozyme gene	Chr6:66738595-66738921 (-)
A/J	MGP_AJ_G0006976	lincRNA gene	Chr6:66738688-66738925 (-)
AKR/J	MGP_AKRJ_G0036736	ribozyme gene	Chr8:745735-746061 (-)
AKR/J	MGP_AKRJ_G0007264	lincRNA gene	Chr8:745828-746065 (-)
BALB/cJ	MGP_BALBcJ_G0036776	ribozyme gene	Chr6:66982454-66982780 (-)
BALB/cJ	MGP_BALBcJ_G0006952	lincRNA gene	Chr6:66982547-66982784 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0037291	ribozyme gene	Chr6:71333774-71334100 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007115	lincRNA gene	Chr6:71333867-71334104 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005037	lincRNA gene	Chr14:42761988-42762225 (-)
CAST/EiJ	MGP_CASTEiJ_G0005401	lincRNA gene	Chr14:41939781-41940018 (-)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0036614	ribozyme gene	Chr8:693201-693527 (-)
DBA/2J	MGP_DBA2J_G0007220	lincRNA gene	Chr8:693294-693531 (-)
FVB/NJ	MGP_FVBNJ_G0036568	ribozyme gene	Chr6:65703626-65703952 (-)
FVB/NJ	MGP_FVBNJ_G0006921	lincRNA gene	Chr6:65703719-65703956 (-)
LP/J	MGP_LPJ_G0036661	ribozyme gene	Chr6:69400427-69400753 (-)
LP/J	MGP_LPJ_G0006981	lincRNA gene	Chr6:69400520-69400757 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036573	ribozyme gene	Chr6:77820906-77821233 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006902	lincRNA gene	Chr6:77824474-77824711 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037405	ribozyme gene	Chr6:68730842-68731168 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007120	lincRNA gene	Chr6:68730935-68731172 (-)
PWK/PhJ	MGP_PWKPhJ_G0005352	lincRNA gene	Chr14:40216673-40216910 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005270	lincRNA gene	Chr14:40705923-40706160 (-)
WSB/EiJ	MGP_WSBEiJ_G0005451	lincRNA gene	Chr14:44739122-44739359 (-)

Gene Ontology
(GO)
Classifications

Expression

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  2

• Ensembl
  ENSMUSG00000088675 (Evidence), ENSMUSG00000106222 (Evidence)
• NCBI Gene
  19783

Representative Sequences			Length	Strain/Species
genomic	19783	NCBI Gene Model | MGI Sequence Detail	238	C57BL/6J
transcript	NR_004434	RefSeq | MGI Sequence Detail	238	C57BL/6

Molecular
Reagents

• All nucleic 1

  Genomic 1

  
  

  Microarray probesets 2

Other
Accession IDs

MGD-MRK-32145

References

• Summaries
  All 7
• Earliest
  J:29462 Li K, et al., Cloning and characterization of three new murine genes encoding short homologues of RNase P RNA. J Biol Chem. 1995 Oct 20;270(42):25281-5