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Spata13 Gene Detail
Summary
  • Symbol
    Spata13
  • Name
    spermatogenesis associated 13
  • Synonyms
    ESTM11, mKIAA1112
  • Feature Type
    protein coding gene
  • IDs
    MGI:104838
    NCBI Gene: 219140
Location & Maps
more
  • Sequence Map
    Chr14:60634001-60764549 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      130549 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    SPATA13, spermatogenesis associated 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SPATA13, spermatogenesis associated 13
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ARHGEF29, ASEF2
  • Links
    NCBI Gene ID: 221178
    neXtProt AC: NX_Q96N96

  • Chr Location
    13q12.12; chr13:23979626-24307074 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    31
  • Chemically induced (other)
    1
  • Gene trapped
    28
  • Targeted
    2
  • Genomic Mutations
    1 involving Spata13
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035020 VEGA Gene Model | MGI Sequence Detail 130549 C57BL/6J ±  kb
transcript OTTMUST00000089047 VEGA | MGI Sequence Detail 7467 Not Applicable  
polypeptide OTTMUSP00000048609 VEGA | MGI Sequence Detail 1244 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    2088 from dbSNP Build 142
  • RFLP
Protein
Information
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  • UniProt
    9 Sequences
  • Protein Ontology
    PR:000015480 spermatogenesis-associated protein 13
  • InterPro Domains
    IPR000219 Dbl homology (DH) domain
    IPR001331 Guanine-nucleotide dissociation stimulator, CDC24, conserved site
    IPR011993 PH domain-like
    IPR001849 Pleckstrin homology domain
    IPR001452 SH3 domain
Molecular
Reagents
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  • All nucleic 108
    cDNA 108

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-28132, MGI:1353612
References
more
  • Summaries
    All 40
    Developmental Gene Expression 7
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:28401 Bettenhausen B, et al., Efficient isolation of novel mouse genes differentially expressed in early postimplantation embryos. Genomics. 1995 Aug 10;28(3):436-41
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory