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Zfp90 Gene Detail
Summary
  • Symbol
    Zfp90
  • Name
    zinc finger protein 90
  • Synonyms
    6430515L01Rik, KRAB17, mKIAA1954, NK10, Nk10 expressed protein, Zfp64, Zfp83
  • Feature Type
    protein coding gene
  • IDs
    MGI:104786
    NCBI Gene: 22751
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:106415283-106425889 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 53.14 cM, cytoband D3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104786
protein coding gene Chr8:106415283-106426598 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034082
protein coding gene Chr8:108778886-108789436 (+)
A/J MGP_AJ_G0034063
protein coding gene Chr8:104430361-104440978 (+)
AKR/J MGP_AKRJ_G0033989
protein coding gene Chr8:107444857-107455407 (+)
BALB/cJ MGP_BALBcJ_G0034056
protein coding gene Chr8:104607666-104618216 (+)
C3H/HeJ MGP_C3HHeJ_G0033768
protein coding gene Chr8:108179732-108190284 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034576
protein coding gene Chr8:112754461-112765011 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031518
protein coding gene Chr8:97557278-97567551 (+)
CAST/EiJ MGP_CASTEiJ_G0033094
protein coding gene Chr8:107714350-107724908 (+)
CBA/J MGP_CBAJ_G0033741
protein coding gene Chr8:116386277-116396848 (+)
DBA/2J MGP_DBA2J_G0033896
protein coding gene Chr8:103760379-103770937 (+)
FVB/NJ MGP_FVBNJ_G0033841
protein coding gene Chr8:102694877-102705831 (+)
LP/J MGP_LPJ_G0033987
protein coding gene Chr8:108979603-108990157 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033885
protein coding gene Chr8:119554555-119565179 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034594
protein coding gene Chr8:107407461-107417999 (+)
PWK/PhJ MGP_PWKPhJ_G0032795
protein coding gene Chr8:103185404-103195837 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032636
protein coding gene Chr8:106122429-106132756 (+)
WSB/EiJ MGP_WSBEiJ_G0033210
protein coding gene Chr8:108104959-108115438 (+)



Homology
more
  • Human Ortholog
    ZFP90, ZFP90 zinc finger protein
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZFP90, ZFP90 zinc finger protein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FIK, NK10, zfp-90, ZNF756
  • Links
    NCBI Gene ID: 146198
    neXtProt AC: NX_Q8TF47
    UniProt: Q8TF47

  • Chr Location
    16q22.1; chr16:68533484-68576072 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotypes from multigenic genotypes
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 22751 NCBI Gene Model | MGI Sequence Detail 10607 C57BL/6J ±  kb
transcript NM_001368330 RefSeq | MGI Sequence Detail 3848 C57BL/6  
polypeptide Q61967 UniProt | EBI | MGI Sequence Detail 636 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 50
    Genomic 2
    cDNA 45
    Primer pair 1
    Other 2

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-28078, MGD-MRK-36355, MGI:107778, MGI:2443803
References
more
  • Summaries
    All 37
    Developmental Gene Expression 4
    Gene Ontology 7
    Phenotypes 5
  • Earliest
    J:29678 Bellefroid EJ, et al., Emergence of the ZNF91 Kruppel-associated box-containing zinc finger gene family in the last common ancestor of anthropoidea. Proc Natl Acad Sci U S A. 1995 Nov 7;92(23):10757-61
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory