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Gt(ROSA)26Sor Gene Detail
Summary
  • Symbol
    Gt(ROSA)26Sor
  • Name
    gene trap ROSA 26, Philippe Soriano
  • Synonyms
    beta geo, Gtrgeo26, Gtrosa26, R26, ROSA26, Thumpd3as1
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:104735
    NCBI Gene: 14910
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr6:113067428-113077333 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9906 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 52.73 cM
  • Mapping Data
    5 experiments
Homology
more
  • Human Ortholog
    THUMPD3-AS1, THUMPD3 antisense RNA 1
  • Human Ortholog
    THUMPD3-AS1, THUMPD3 antisense RNA 1
    Orthology source: HGNC
  • Synonyms
    SETD5-AS1
  • Links
    NCBI Gene ID: 440944

  • Chr Location
    3p25.3; chr3:9385264-9397494 (-)  GRCh38.p7

Human Diseases
less
  • Mutations/Alleles
    43 with disease annotations
  • References
    58 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1847 phenotypes from multigenic genotypes
    84 images
    7617 phenotype references
  • All Mutations and Alleles
    919
  • Endonuclease-mediated
    5
  • Gene trapped
    185
  • Spontaneous
    1
  • Targeted
    725
  • Transgenic
    3
  • Genomic Mutations
    1 involving Gt(ROSA)26Sor
  • Find Mice (IMSR)
  • Recombinase Activity
Mice homozygous for the original gene trap insertion and a targeted mutation mimicking the original gene trap exhibit no abnormal phenotype.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034748 VEGA Gene Model | MGI Sequence Detail 9906 C57BL/6J ±  kb
transcript OTTMUST00000088311 VEGA | MGI Sequence Detail 1181 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    59 from dbSNP Build 142
  • RFLP
Molecular
Reagents
less
  • All nucleic 44
    Genomic 3
    cDNA 41

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-27098, MGI:2141626
References
more
  • Summaries
    All 7672
    Developmental Gene Expression 13
    Diseases 58
    Phenotypes 7617
  • Earliest
    J:12736 Hayasaka I, et al., Polydactyly Nagoya, Pdn: A new mutant gene in the mouse. Jikken Dobutsu. 1980 Oct;29(4):391-5
  • Latest
    J:261268 Octeau JC, et al., An Optical Neuron-Astrocyte Proximity Assay at Synaptic Distance Scales. Neuron. 2018 Apr 4;98(1):49-66.e9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/08/2018
MGI 6.12
The Jackson Laboratory