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Rbmy
Gene Detail
Symbol

Name
ID
Rbmy
RNA binding motif protein, Y chromosome
MGI:104732
Synonyms
RBM, Rbm1, Rbm1-rs1, Rbmy1a1, Rbmy1a1-rs1
Feature Type
protein coding gene
Genetic Map
Chromosome Y
Syntenic

Mapping data(5)
Sequence Map
ChrY:2830680-2841854 bp, + strand
From VEGA annotation of GRCm38

  11175 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:136626  Vertebrate Homology Class
9 mouse

Gene Tree: Rbmy

Interactions
Rbmy interacts with 78 markers (Mir1a-1, Mir1a-2, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Process hematopoietic progenitor cell differentiation
Component nucleus
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (41)    Tissues (31)    Images (5)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 20
RT-PCR 21
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(20) Genomic(8) cDNA(8) Primer pair(4)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000045391 (Evidence)
Ensembl Gene ModelENSMUSG00000094658 (Evidence)
Entrez Gene19657 (Evidence)
UniGene4711
DFCITC1591627
DoTSDT.87049262, DT.91335889
NIA Mouse Gene IndexU090731, U120023, U175420, U300034, U317239
Consensus CDS ProjectCCDS30546.1
International Mouse Knockout Project StatusRbmy
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045391 VEGA Gene Model | MGI Sequence Detail 11175 C57BL/6J ±  kb
transcript OTTMUST00000119120 VEGA | MGI Sequence Detail 1573 Not Applicable 
polypeptide OTTMUSP00000066372 VEGA | MGI Sequence Detail 380 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(10)
Polymorphisms
All PCR and RFLP(3) : PCR(1) RFLP(2) SNPs within 2kb(3 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000030954 RNA-binding motif protein, Y chromosome, family 1 member A1
References
(Earliest) J:24464 Ma K, et al., A Y chromosome gene family with RNA-binding protein homology: candidates for the azoospermia factor AZF controlling human spermatogenesis. Cell. 1993 Dec 31;75(7):1287-95
(Latest) J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17
All references(32)
Other
accession IDs
MGD-MRK-26077, MGD-MRK-27095, MGI:104639

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory