Ccr1l1
Gene Detail

Symbol Name ID

Ccr1l1 chemokine (C-C motif) receptor 1-like 1 MGI:104617

Synonyms

Cmkbr1l1, MIP-1 alphaRL1

Feature Type

protein coding gene

Genetic Map

Chromosome 9

75.05 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr9:123976949-123978408 bp, - strand From NCBI annotation of GRCm38   1460 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

rat    (Mammalian Orthology)
Protein SuperFamily: chemokine receptor
Gene Tree: Ccr1l1

Alleles and phenotypes

All alleles(1) : Targeted(1)
 

Mice homozygous for a targeted null mutation do not exhibit any significant abnormalities compared to controls.

 

Gene Ontology (GO) classifications

All GO classifications: (19 annotations)

Process	chemokine-mediated signaling pathway, chemotaxis, ...
Component	integral to membrane, membrane, ...
Function	C-C chemokine binding, C-C chemokine receptor activity, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (79)    Tissues (49)    Images (1)
Theiler Stages: 13, 20, 28

Assay Type	Results
In situ reporter (knock in)	36
RT-PCR	38
RNase protection	5

cDNA source data(5)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(9) Genomic(1) cDNA(5) Primer pair(1) Other(2)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000064039 (Evidence)
Entrez Gene	12770 (Evidence)
UniGene	423532
DFCI	TC1632735
DoTS	DT.91359329
NIA Mouse Gene Index	U031485
Consensus CDS Project	CCDS23667.1
International Mouse Knockout Project Status	Ccr1l1

Sequences

Length	Strain/Species
genomic	12770	NCBI Gene Model | MGI Sequence Detail	1460	C57BL/6J
transcript	NM_007718	RefSeq | MGI Sequence Detail	1460	Not Specified
polypeptide	P51676	UniProt | EBI | MGI Sequence Detail	356	Not Applicable

All sequences(14) RefSeq(2) UniProt(1)

Polymorphisms

RFLP(2) : SNPs(7 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002236	CC chemokine receptor, type 1
InterPro	IPR000355	Chemokine receptor
InterPro	IPR000276	GPCR, rhodopsin-like
InterPro	IPR017452	GPCR, rhodopsin-like, 7TM
Protein Ontology	PR:000001253	C-C chemokine receptor 1-like protein 1

Graphical View of Protein Domain Structure

References

(Earliest) J:27219 Gao JL, et al., Cloning and differential tissue-specific expression of three mouse beta chemokine receptor-like genes, including the gene for a functional macrophage inflammatory protein-1 alpha receptor. J Biol Chem. 1995 Jul 21;270(29):17494-501
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)

Other accession IDs

MGD-MRK-26054