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Ccr1l1
Gene Detail
 Symbol
Name
ID
Ccr1l1
chemokine (C-C motif) receptor 1-like 1
MGI:104617
Synonyms Cmkbr1l1, MIP-1 alphaRL1
Feature Type protein coding gene
Genetic Map
Chromosome 9
75.05 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:123976949-123978408 bp, - strand
From NCBI annotation of GRCm38

  1460 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56388  Vertebrate Homology Class
1 mouse; 1 rat

Protein SuperFamily: chemokine receptor
Gene Tree: Ccr1l1

Alleles
and
phenotypes
All alleles(1) : Targeted(1)
 
Mice homozygous for a targeted null mutation do not exhibit any significant abnormalities compared to controls.
 
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process chemotaxis, G-protein coupled receptor signaling pathway, ...
Component integral component of membrane, membrane, ...
Function C-C chemokine receptor activity, chemokine receptor activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (79)    Tissues (49)    Images (1)
Theiler Stages: 13, 20, 28
Assay TypeResults
In situ reporter (knock in) 36
RT-PCR 38
RNase protection 5
cDNA source data(5)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(9) Genomic(1) cDNA(5) Primer pair(1) Other(2)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000064039 (Evidence)
Entrez Gene12770 (Evidence)
UniGene423532
DFCITC1632735
DoTSDT.91359329
NIA Mouse Gene IndexU031485
Consensus CDS ProjectCCDS23667.1
International Mouse Knockout Project StatusCcr1l1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 12770 NCBI Gene Model | MGI Sequence Detail 1460 C57BL/6J ±  kb
transcript NM_007718 RefSeq | MGI Sequence Detail 1460 Not Specified 
polypeptide P51676 UniProt | EBI | MGI Sequence Detail 356 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(2) UniProt(1)
Polymorphisms RFLP(2) : SNPs within 2kb(18 from dbSNP Build 137)    SNPs within 2kb including multiple locations(22)
Protein-related
information
ResourceIDDescription
InterPro IPR002236 CC chemokine receptor 1
InterPro IPR000355 Chemokine receptor family
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
Protein Ontology PR:000001253 C-C chemokine receptor 1-like protein 1
Graphical View of Protein Domain Structure
References (Earliest) J:27219 Gao JL, et al., Cloning and differential tissue-specific expression of three mouse beta chemokine receptor-like genes, including the gene for a functional macrophage inflammatory protein-1 alpha receptor. J Biol Chem. 1995 Jul 21;270(29):17494-501
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)
Other
accession IDs
MGD-MRK-26054

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory