About   Help   FAQ
Take the Alliance for Genomic Resources User Survey
Rcn1 Gene Detail
Summary
  • Symbol
    Rcn1
  • Name
    reticulocalbin 1
  • Synonyms
    Rcn
  • Feature Type
    protein coding gene
  • IDs
    MGI:104559
    NCBI Gene: 19672
  • Gene Overview
    MyGene.info: RCN1
Location & Maps
more
  • Sequence Map
    Chr2:105386291-105399319 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      13029 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 55.18 cM
  • Mapping Data
    7 experiments
Homology
more
  • Human Ortholog
    RCN1, reticulocalbin 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RCN1, reticulocalbin 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HEL-S-84, PIG20, RCAL, RCN
  • Links
    NCBI Gene ID: 5954
    neXtProt AC: NX_Q15293

  • Chr Location
    11p13; chr11:32090931-32105726 (+)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    3
  • Genomic Mutations
    3 involving Rcn1
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    414
  • Tissues
    25
  • cDNA Data
    76
  • Literature Summary
    4
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014990 VEGA Gene Model | MGI Sequence Detail 13029 C57BL/6J ±  kb
transcript OTTMUST00000035593 VEGA | MGI Sequence Detail 2720 Not Applicable  
polypeptide OTTMUSP00000015956 VEGA | MGI Sequence Detail 325 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    138 from dbSNP Build 142
  • PCR
    1
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 80
    Genomic 3
    cDNA 76
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-25993
References
more
  • Summaries
    All 33
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:26801 Ozawa M, et al., Reticulocalbin, a novel endoplasmic reticulum resident Ca(2+)-binding protein with multiple EF-hand motifs and a carboxyl-terminal HDEL sequence. J Biol Chem. 1993 Jan 5;268(1):699-705
  • Latest
    J:174459 Boyle MP, et al., Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala. J Comp Neurol. 2011 Aug 1;519(11):2061-89
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory